Experiment: m.b. Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1744 and Dshi_1745 are separated by 88 nucleotides Dshi_1745 and Dshi_1746 are separated by 52 nucleotides Dshi_1746 and Dshi_1747 are separated by 99 nucleotides
Dshi_1744: Dshi_1744 - pantetheine-phosphate adenylyltransferase (RefSeq), at 1,810,248 to 1,810,763
_1744
Dshi_1745: Dshi_1745 - putative signal-transduction protein with CBS domains (RefSeq), at 1,810,852 to 1,811,286
_1745
Dshi_1746: Dshi_1746 - transcriptional regulator, LysR family (RefSeq), at 1,811,339 to 1,812,232
_1746
Dshi_1747: Dshi_1747 - methylmalonate-semialdehyde dehydrogenase (RefSeq), at 1,812,332 to 1,813,831
_1747
Position (kb)
1811
1812
1813 Strain fitness (log2 ratio)
-2
-1
0
1 at 1810.822 kb on + strand at 1810.827 kb on + strand at 1810.830 kb on - strand at 1810.841 kb on - strand at 1811.038 kb on + strand, within Dshi_1745 at 1811.108 kb on - strand, within Dshi_1745 at 1811.182 kb on - strand, within Dshi_1745 at 1811.290 kb on - strand at 1811.316 kb on - strand at 1811.324 kb on + strand at 1811.767 kb on - strand, within Dshi_1746 at 1811.781 kb on + strand, within Dshi_1746 at 1811.799 kb on - strand, within Dshi_1746 at 1811.831 kb on + strand, within Dshi_1746 at 1811.935 kb on - strand, within Dshi_1746 at 1811.962 kb on + strand, within Dshi_1746 at 1812.221 kb on + strand at 1812.302 kb on + strand at 1812.317 kb on + strand at 1812.587 kb on + strand, within Dshi_1747 at 1812.645 kb on + strand, within Dshi_1747 at 1812.645 kb on + strand, within Dshi_1747 at 1812.645 kb on + strand, within Dshi_1747 at 1812.645 kb on + strand, within Dshi_1747 at 1812.645 kb on + strand, within Dshi_1747 at 1812.653 kb on - strand, within Dshi_1747 at 1812.653 kb on - strand, within Dshi_1747 at 1812.713 kb on + strand, within Dshi_1747 at 1812.713 kb on + strand, within Dshi_1747 at 1813.013 kb on - strand, within Dshi_1747
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.015 mg/ml remove 1,810,822 + -0.2 1,810,827 + +0.4 1,810,830 - +0.4 1,810,841 - +1.0 1,811,038 + Dshi_1745 0.43 +0.3 1,811,108 - Dshi_1745 0.59 +0.5 1,811,182 - Dshi_1745 0.76 -0.5 1,811,290 - +0.7 1,811,316 - +1.1 1,811,324 + +0.1 1,811,767 - Dshi_1746 0.48 +0.3 1,811,781 + Dshi_1746 0.49 +1.5 1,811,799 - Dshi_1746 0.51 +0.2 1,811,831 + Dshi_1746 0.55 -1.2 1,811,935 - Dshi_1746 0.67 -2.3 1,811,962 + Dshi_1746 0.70 -0.9 1,812,221 + +0.0 1,812,302 + -0.0 1,812,317 + -0.4 1,812,587 + Dshi_1747 0.17 +0.6 1,812,645 + Dshi_1747 0.21 +0.7 1,812,645 + Dshi_1747 0.21 -0.1 1,812,645 + Dshi_1747 0.21 -0.3 1,812,645 + Dshi_1747 0.21 +0.5 1,812,645 + Dshi_1747 0.21 -0.9 1,812,653 - Dshi_1747 0.21 -0.9 1,812,653 - Dshi_1747 0.21 +0.4 1,812,713 + Dshi_1747 0.25 +0.2 1,812,713 + Dshi_1747 0.25 -0.9 1,813,013 - Dshi_1747 0.45 +1.6
Or see this region's nucleotide sequence