Experiment: m.b. Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1632 and Dshi_1633 are separated by 11 nucleotides Dshi_1633 and Dshi_1634 are separated by 171 nucleotides Dshi_1634 and Dshi_1635 are separated by 2 nucleotides Dshi_1635 and Dshi_1636 are separated by 85 nucleotides
Dshi_1632: Dshi_1632 - Cysteine desulfurase (RefSeq), at 1,696,137 to 1,697,183
_1632
Dshi_1633: Dshi_1633 - transcriptional regulator, BadM/Rrf2 family (RefSeq), at 1,697,195 to 1,697,683
_1633
Dshi_1634: Dshi_1634 - hypothetical protein (RefSeq), at 1,697,855 to 1,698,508
_1634
Dshi_1635: Dshi_1635 - hypothetical protein (RefSeq), at 1,698,511 to 1,698,726
_1635
Dshi_1636: Dshi_1636 - protein of unknown function DUF125 transmembrane (RefSeq), at 1,698,812 to 1,699,540
_1636
Position (kb)
1697
1698
1699 Strain fitness (log2 ratio)
-1
0
1
2 at 1697.695 kb on - strand at 1698.486 kb on + strand at 1698.660 kb on - strand, within Dshi_1635 at 1698.735 kb on - strand at 1698.905 kb on + strand, within Dshi_1636 at 1698.913 kb on - strand, within Dshi_1636 at 1698.947 kb on + strand, within Dshi_1636 at 1699.280 kb on - strand, within Dshi_1636 at 1699.353 kb on + strand, within Dshi_1636 at 1699.366 kb on - strand, within Dshi_1636 at 1699.403 kb on - strand, within Dshi_1636 at 1699.435 kb on + strand, within Dshi_1636 at 1699.474 kb on - strand at 1699.499 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.015 mg/ml remove 1,697,695 - -1.3 1,698,486 + -0.3 1,698,660 - Dshi_1635 0.69 -1.3 1,698,735 - -0.5 1,698,905 + Dshi_1636 0.13 -0.8 1,698,913 - Dshi_1636 0.14 -0.4 1,698,947 + Dshi_1636 0.19 +0.8 1,699,280 - Dshi_1636 0.64 +0.3 1,699,353 + Dshi_1636 0.74 +0.3 1,699,366 - Dshi_1636 0.76 +0.8 1,699,403 - Dshi_1636 0.81 +0.1 1,699,435 + Dshi_1636 0.85 +1.8 1,699,474 - +0.2 1,699,499 + +0.2
Or see this region's nucleotide sequence