Experiment: m.b. Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0659 and Dshi_0660 are separated by 52 nucleotides Dshi_0660 and Dshi_0661 are separated by 337 nucleotides
Dshi_0659: Dshi_0659 - oxygen-independent coproporphyrinogen III oxidase (RefSeq), at 662,948 to 664,309
_0659
Dshi_0660: Dshi_0660 - transcriptional regulator, Crp/Fnr family (RefSeq), at 664,362 to 665,111
_0660
Dshi_0661: Dshi_0661 - cytochrome c oxidase, cbb3-type, subunit I (RefSeq), at 665,449 to 667,050
_0661
Position (kb) 664
665
666 Strain fitness (log2 ratio) -1
0
1
2 at 663.375 kb on - strand, within Dshi_0659 at 663.508 kb on + strand, within Dshi_0659 at 663.516 kb on - strand, within Dshi_0659 at 663.520 kb on + strand, within Dshi_0659 at 663.530 kb on + strand, within Dshi_0659 at 663.818 kb on + strand, within Dshi_0659 at 663.840 kb on + strand, within Dshi_0659 at 663.855 kb on + strand, within Dshi_0659 at 663.875 kb on + strand, within Dshi_0659 at 664.090 kb on - strand, within Dshi_0659 at 664.095 kb on - strand, within Dshi_0659 at 664.209 kb on + strand at 664.234 kb on + strand at 664.324 kb on - strand at 664.338 kb on - strand at 664.349 kb on - strand at 664.439 kb on - strand, within Dshi_0660 at 664.442 kb on + strand, within Dshi_0660 at 664.450 kb on - strand, within Dshi_0660 at 664.450 kb on - strand, within Dshi_0660 at 664.450 kb on - strand, within Dshi_0660 at 664.474 kb on + strand, within Dshi_0660 at 664.727 kb on + strand, within Dshi_0660 at 664.916 kb on - strand, within Dshi_0660 at 665.294 kb on + strand at 665.392 kb on - strand at 665.443 kb on + strand at 665.548 kb on + strand at 665.556 kb on - strand at 665.590 kb on - strand at 665.683 kb on + strand, within Dshi_0661 at 665.686 kb on + strand, within Dshi_0661 at 665.759 kb on - strand, within Dshi_0661 at 665.759 kb on - strand, within Dshi_0661 at 665.796 kb on - strand, within Dshi_0661 at 665.796 kb on - strand, within Dshi_0661 at 665.859 kb on + strand, within Dshi_0661 at 665.976 kb on + strand, within Dshi_0661 at 666.035 kb on + strand, within Dshi_0661
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.015 mg/ml remove 663,375 - Dshi_0659 0.31 +0.9 663,508 + Dshi_0659 0.41 -0.5 663,516 - Dshi_0659 0.42 +0.2 663,520 + Dshi_0659 0.42 +0.9 663,530 + Dshi_0659 0.43 +0.5 663,818 + Dshi_0659 0.64 -0.7 663,840 + Dshi_0659 0.65 +0.5 663,855 + Dshi_0659 0.67 -0.3 663,875 + Dshi_0659 0.68 +0.0 664,090 - Dshi_0659 0.84 -0.9 664,095 - Dshi_0659 0.84 +0.2 664,209 + +1.3 664,234 + -0.2 664,324 - -1.5 664,338 - -0.6 664,349 - +0.9 664,439 - Dshi_0660 0.10 +1.9 664,442 + Dshi_0660 0.11 +0.9 664,450 - Dshi_0660 0.12 +0.3 664,450 - Dshi_0660 0.12 +0.9 664,450 - Dshi_0660 0.12 +0.9 664,474 + Dshi_0660 0.15 +0.4 664,727 + Dshi_0660 0.49 +2.5 664,916 - Dshi_0660 0.74 +0.0 665,294 + -0.5 665,392 - -0.7 665,443 + +0.7 665,548 + +0.9 665,556 - +0.9 665,590 - +0.9 665,683 + Dshi_0661 0.15 +0.3 665,686 + Dshi_0661 0.15 +0.9 665,759 - Dshi_0661 0.19 +0.1 665,759 - Dshi_0661 0.19 -1.1 665,796 - Dshi_0661 0.22 +1.3 665,796 - Dshi_0661 0.22 -0.1 665,859 + Dshi_0661 0.26 -1.1 665,976 + Dshi_0661 0.33 -0.9 666,035 + Dshi_0661 0.37 +0.4
Or see this region's nucleotide sequence