Experiment: m.b. Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0595 and Dshi_0596 are separated by 248 nucleotides Dshi_0596 and Dshi_0597 are separated by 183 nucleotides
Dshi_0595: Dshi_0595 - cell shape determining protein, MreB/Mrl family (RefSeq), at 585,804 to 586,841
_0595
Dshi_0596: Dshi_0596 - 2-isopropylmalate synthase (RefSeq), at 587,090 to 588,667
_0596
Dshi_0597: Dshi_0597 - hypothetical protein (RefSeq), at 588,851 to 589,648
_0597
Position (kb) 587
588
589 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 587.037 kb on + strand at 587.178 kb on + strand at 587.191 kb on - strand at 587.197 kb on + strand at 587.412 kb on + strand, within Dshi_0596 at 587.677 kb on - strand, within Dshi_0596 at 588.430 kb on + strand, within Dshi_0596 at 588.574 kb on + strand at 588.607 kb on - strand at 588.686 kb on + strand at 588.730 kb on - strand at 588.749 kb on + strand at 588.757 kb on - strand at 588.848 kb on + strand at 588.902 kb on - strand at 588.919 kb on + strand at 589.008 kb on + strand, within Dshi_0597 at 589.047 kb on - strand, within Dshi_0597 at 589.176 kb on - strand, within Dshi_0597 at 589.184 kb on - strand, within Dshi_0597 at 589.188 kb on - strand, within Dshi_0597 at 589.231 kb on - strand, within Dshi_0597 at 589.233 kb on + strand, within Dshi_0597 at 589.239 kb on + strand, within Dshi_0597 at 589.247 kb on + strand, within Dshi_0597 at 589.257 kb on + strand, within Dshi_0597 at 589.285 kb on + strand, within Dshi_0597 at 589.285 kb on + strand, within Dshi_0597 at 589.293 kb on - strand, within Dshi_0597 at 589.302 kb on - strand, within Dshi_0597 at 589.310 kb on - strand, within Dshi_0597 at 589.372 kb on + strand, within Dshi_0597 at 589.420 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.438 kb on - strand, within Dshi_0597 at 589.438 kb on - strand, within Dshi_0597 at 589.438 kb on - strand, within Dshi_0597 at 589.438 kb on - strand, within Dshi_0597 at 589.456 kb on + strand, within Dshi_0597 at 589.496 kb on - strand, within Dshi_0597 at 589.535 kb on + strand, within Dshi_0597 at 589.543 kb on - strand, within Dshi_0597 at 589.565 kb on + strand, within Dshi_0597 at 589.590 kb on - strand at 589.595 kb on + strand at 589.602 kb on + strand at 589.602 kb on + strand at 589.610 kb on - strand at 589.610 kb on - strand at 589.629 kb on + strand at 589.637 kb on - strand at 589.639 kb on - strand at 589.651 kb on - strand at 589.658 kb on - strand at 589.658 kb on - strand at 589.658 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.015 mg/ml remove 587,037 + +1.2 587,178 + -0.9 587,191 - -0.4 587,197 + +0.7 587,412 + Dshi_0596 0.20 -0.1 587,677 - Dshi_0596 0.37 -2.3 588,430 + Dshi_0596 0.85 -0.7 588,574 + -1.1 588,607 - -1.4 588,686 + -2.4 588,730 - +0.9 588,749 + -0.1 588,757 - -0.2 588,848 + +0.9 588,902 - -1.3 588,919 + -0.2 589,008 + Dshi_0597 0.20 -0.6 589,047 - Dshi_0597 0.25 -0.4 589,176 - Dshi_0597 0.41 +0.9 589,184 - Dshi_0597 0.42 +2.1 589,188 - Dshi_0597 0.42 +0.6 589,231 - Dshi_0597 0.48 +0.1 589,233 + Dshi_0597 0.48 -0.2 589,239 + Dshi_0597 0.49 +0.6 589,247 + Dshi_0597 0.50 +0.4 589,257 + Dshi_0597 0.51 +3.9 589,285 + Dshi_0597 0.54 -0.7 589,285 + Dshi_0597 0.54 -2.3 589,293 - Dshi_0597 0.55 -0.7 589,302 - Dshi_0597 0.57 +0.3 589,310 - Dshi_0597 0.58 +0.1 589,372 + Dshi_0597 0.65 -2.4 589,420 + Dshi_0597 0.71 -0.1 589,430 + Dshi_0597 0.73 -1.0 589,430 + Dshi_0597 0.73 -0.3 589,430 + Dshi_0597 0.73 -1.2 589,430 + Dshi_0597 0.73 -0.6 589,430 + Dshi_0597 0.73 -0.1 589,430 + Dshi_0597 0.73 -0.5 589,430 + Dshi_0597 0.73 +0.3 589,430 + Dshi_0597 0.73 -0.6 589,430 + Dshi_0597 0.73 -0.6 589,438 - Dshi_0597 0.74 -0.4 589,438 - Dshi_0597 0.74 +0.2 589,438 - Dshi_0597 0.74 +1.9 589,438 - Dshi_0597 0.74 -0.3 589,456 + Dshi_0597 0.76 -0.7 589,496 - Dshi_0597 0.81 -0.5 589,535 + Dshi_0597 0.86 +0.3 589,543 - Dshi_0597 0.87 -2.0 589,565 + Dshi_0597 0.89 -0.4 589,590 - +2.9 589,595 + +1.5 589,602 + +0.0 589,602 + -0.6 589,610 - -1.7 589,610 - -0.0 589,629 + -1.4 589,637 - -1.4 589,639 - -0.1 589,651 - +0.2 589,658 - +0.2 589,658 - +0.1 589,658 - -1.0
Or see this region's nucleotide sequence