Experiment: m.b. Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0337 and Dshi_0338 are separated by 381 nucleotides Dshi_0338 and Dshi_0339 are separated by 207 nucleotides
Dshi_0337: Dshi_0337 - ATPase MipZ (RefSeq), at 325,428 to 326,237
_0337
Dshi_0338: Dshi_0338 - beta-lactamase domain protein (RefSeq), at 326,619 to 327,452
_0338
Dshi_0339: Dshi_0339 - protein of unknown function DUF849 (RefSeq), at 327,660 to 328,538
_0339
Position (kb) 326
327
328 Strain fitness (log2 ratio) -2
-1
0
1
2 at 325.674 kb on - strand, within Dshi_0337 at 325.795 kb on - strand, within Dshi_0337 at 325.983 kb on - strand, within Dshi_0337 at 326.288 kb on + strand at 326.288 kb on + strand at 326.288 kb on + strand at 326.288 kb on + strand at 326.288 kb on + strand at 326.296 kb on - strand at 326.296 kb on - strand at 326.339 kb on + strand at 326.340 kb on + strand at 326.342 kb on - strand at 326.342 kb on - strand at 326.358 kb on - strand at 326.432 kb on + strand at 326.467 kb on + strand at 326.499 kb on - strand at 326.514 kb on - strand at 326.740 kb on + strand, within Dshi_0338 at 326.910 kb on + strand, within Dshi_0338 at 326.995 kb on - strand, within Dshi_0338 at 327.073 kb on - strand, within Dshi_0338 at 327.118 kb on - strand, within Dshi_0338 at 327.247 kb on + strand, within Dshi_0338 at 327.247 kb on + strand, within Dshi_0338 at 327.268 kb on + strand, within Dshi_0338 at 327.556 kb on - strand at 327.575 kb on + strand at 327.759 kb on + strand, within Dshi_0339 at 327.786 kb on + strand, within Dshi_0339 at 327.786 kb on + strand, within Dshi_0339 at 327.794 kb on - strand, within Dshi_0339 at 327.794 kb on - strand, within Dshi_0339 at 327.834 kb on - strand, within Dshi_0339 at 327.920 kb on + strand, within Dshi_0339 at 328.186 kb on - strand, within Dshi_0339 at 328.187 kb on - strand, within Dshi_0339 at 328.247 kb on + strand at 328.303 kb on - strand, within Dshi_0339 at 328.389 kb on - strand, within Dshi_0339
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.015 mg/ml remove 325,674 - Dshi_0337 0.30 -1.0 325,795 - Dshi_0337 0.45 -0.8 325,983 - Dshi_0337 0.69 -1.0 326,288 + -1.6 326,288 + -0.0 326,288 + -1.0 326,288 + -0.3 326,288 + -1.3 326,296 - -1.9 326,296 - -1.9 326,339 + -0.5 326,340 + +1.0 326,342 - +0.3 326,342 - +0.8 326,358 - +0.1 326,432 + -0.1 326,467 + -0.0 326,499 - +0.5 326,514 - -0.0 326,740 + Dshi_0338 0.15 +0.7 326,910 + Dshi_0338 0.35 -1.4 326,995 - Dshi_0338 0.45 +0.6 327,073 - Dshi_0338 0.54 -0.9 327,118 - Dshi_0338 0.60 +0.4 327,247 + Dshi_0338 0.75 +1.1 327,247 + Dshi_0338 0.75 -0.1 327,268 + Dshi_0338 0.78 +2.4 327,556 - +0.4 327,575 + -0.0 327,759 + Dshi_0339 0.11 +1.0 327,786 + Dshi_0339 0.14 -0.0 327,786 + Dshi_0339 0.14 -0.1 327,794 - Dshi_0339 0.15 -1.0 327,794 - Dshi_0339 0.15 +0.4 327,834 - Dshi_0339 0.20 -1.0 327,920 + Dshi_0339 0.30 -0.2 328,186 - Dshi_0339 0.60 -0.4 328,187 - Dshi_0339 0.60 -0.8 328,247 + -0.0 328,303 - Dshi_0339 0.73 +2.5 328,389 - Dshi_0339 0.83 -0.6
Or see this region's nucleotide sequence