Experiment: m.b. Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0154 and Dshi_0155 are separated by 710 nucleotides Dshi_0155 and Dshi_0156 overlap by 8 nucleotides Dshi_0156 and Dshi_0157 are separated by 11 nucleotides
Dshi_0154: Dshi_0154 - NADPH-dependent FMN reductase (RefSeq), at 154,275 to 154,820
_0154
Dshi_0155: Dshi_0155 - LrgA family protein (RefSeq), at 155,531 to 155,887
_0155
Dshi_0156: Dshi_0156 - LrgB family protein (RefSeq), at 155,880 to 156,596
_0156
Dshi_0157: Dshi_0157 - cob(I)alamin adenosyltransferase (RefSeq), at 156,608 to 157,222
_0157
Position (kb)
155
156 Strain fitness (log2 ratio)
-1
0
1
2
3 at 154.553 kb on - strand, within Dshi_0154 at 154.760 kb on - strand, within Dshi_0154 at 154.797 kb on + strand at 154.805 kb on + strand at 154.814 kb on + strand at 154.848 kb on - strand at 154.853 kb on - strand at 154.854 kb on + strand at 154.953 kb on - strand at 155.014 kb on + strand at 155.032 kb on - strand at 155.065 kb on + strand at 155.073 kb on - strand at 155.073 kb on - strand at 155.252 kb on - strand at 155.304 kb on - strand at 155.352 kb on - strand at 155.371 kb on - strand at 155.483 kb on + strand at 155.491 kb on - strand at 155.491 kb on - strand at 155.491 kb on - strand at 155.491 kb on - strand at 155.520 kb on + strand at 155.600 kb on - strand, within Dshi_0155 at 155.638 kb on + strand, within Dshi_0155 at 155.826 kb on + strand at 155.881 kb on + strand at 155.974 kb on + strand, within Dshi_0156 at 155.997 kb on + strand, within Dshi_0156 at 156.167 kb on - strand, within Dshi_0156 at 156.329 kb on + strand, within Dshi_0156 at 156.413 kb on - strand, within Dshi_0156 at 156.473 kb on + strand, within Dshi_0156 at 156.549 kb on + strand at 156.561 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.015 mg/ml remove 154,553 - Dshi_0154 0.51 -1.6 154,760 - Dshi_0154 0.89 -0.4 154,797 + +2.6 154,805 + -1.0 154,814 + +0.1 154,848 - -0.0 154,853 - +0.2 154,854 + -0.1 154,953 - -1.2 155,014 + +0.6 155,032 - +1.4 155,065 + -0.5 155,073 - +0.2 155,073 - +1.6 155,252 - -0.6 155,304 - -0.4 155,352 - -1.3 155,371 - -0.1 155,483 + +3.0 155,491 - -0.2 155,491 - -0.2 155,491 - +0.4 155,491 - +0.1 155,520 + +2.4 155,600 - Dshi_0155 0.19 +1.4 155,638 + Dshi_0155 0.30 +0.2 155,826 + -1.6 155,881 + +0.7 155,974 + Dshi_0156 0.13 +0.3 155,997 + Dshi_0156 0.16 -0.1 156,167 - Dshi_0156 0.40 -0.6 156,329 + Dshi_0156 0.63 -0.3 156,413 - Dshi_0156 0.74 -0.7 156,473 + Dshi_0156 0.83 -0.1 156,549 + -0.2 156,561 + +0.1
Or see this region's nucleotide sequence