Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08770

Experiment: H2 N-free with 2mM Adenosine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	H2 N-free with 2mM Adenosine
1,615,350	-		MMJJ_RS08765	0.14	-0.5
1,615,351	+		MMJJ_RS08765	0.14	-0.8
1,615,352	-		MMJJ_RS08765	0.14	-1.7
1,615,352	-		MMJJ_RS08765	0.14	-1.5
1,615,352	-		MMJJ_RS08765	0.14	+0.3
1,615,352	-		MMJJ_RS08765	0.14	+0.4
1,615,353	+		MMJJ_RS08765	0.14	-3.0
1,615,353	+		MMJJ_RS08765	0.14	+2.4
1,615,353	+		MMJJ_RS08765	0.14	+0.3
1,615,353	+		MMJJ_RS08765	0.14	-0.3
1,615,353	+		MMJJ_RS08765	0.14	-0.9
1,615,473	-		MMJJ_RS08765	0.24	-0.7
1,615,474	+		MMJJ_RS08765	0.24	-1.8
1,615,496	+		MMJJ_RS08765	0.26	+0.2
1,615,514	+		MMJJ_RS08765	0.28	-0.5
1,615,536	-		MMJJ_RS08765	0.30	-1.3
1,615,541	+		MMJJ_RS08765	0.30	-0.1
1,615,546	+		MMJJ_RS08765	0.31	+0.7
1,615,567	-		MMJJ_RS08765	0.33	-0.7
1,615,568	+		MMJJ_RS08765	0.33	+0.6
1,615,568	+		MMJJ_RS08765	0.33	-1.0
1,615,568	+		MMJJ_RS08765	0.33	+0.5
1,615,568	+		MMJJ_RS08765	0.33	+1.4
1,615,574	+		MMJJ_RS08765	0.33	+0.1
1,615,584	-		MMJJ_RS08765	0.34	-0.6
1,615,584	-		MMJJ_RS08765	0.34	-0.6
1,615,585	+		MMJJ_RS08765	0.34	-0.8
1,615,588	-		MMJJ_RS08765	0.34	-0.8
1,615,589	+		MMJJ_RS08765	0.34	-0.2
1,615,589	+		MMJJ_RS08765	0.34	-0.7
1,615,589	+		MMJJ_RS08765	0.34	-0.9
1,615,591	-		MMJJ_RS08765	0.35	-0.5
1,615,591	-		MMJJ_RS08765	0.35	-0.8
1,615,592	+		MMJJ_RS08765	0.35	-0.1
1,615,593	-		MMJJ_RS08765	0.35	-1.2
1,615,593	-		MMJJ_RS08765	0.35	+1.4
1,615,593	-		MMJJ_RS08765	0.35	-0.2
1,615,594	+		MMJJ_RS08765	0.35	-2.5
1,615,594	+		MMJJ_RS08765	0.35	+0.4
1,615,594	+		MMJJ_RS08765	0.35	-1.7
1,615,594	+		MMJJ_RS08765	0.35	-1.2
1,615,594	+		MMJJ_RS08765	0.35	+1.8
1,615,619	+		MMJJ_RS08765	0.37	+2.4
1,615,625	-		MMJJ_RS08765	0.38	-0.5
1,615,625	-		MMJJ_RS08765	0.38	-1.9
1,615,626	+		MMJJ_RS08765	0.38	+1.6
1,615,626	+		MMJJ_RS08765	0.38	+0.4
1,615,626	+		MMJJ_RS08765	0.38	+0.8
1,615,626	+		MMJJ_RS08765	0.38	-0.4
1,615,626	+		MMJJ_RS08765	0.38	-2.0
1,615,626	+		MMJJ_RS08765	0.38	+0.8
1,615,734	-		MMJJ_RS08765	0.47	+0.5
1,615,748	-		MMJJ_RS08765	0.48	+0.5
1,615,756	-		MMJJ_RS08765	0.49	-1.6
1,615,759	-		MMJJ_RS08765	0.49	+0.2
1,615,759	-		MMJJ_RS08765	0.49	-1.8
1,615,762	-		MMJJ_RS08765	0.49	+0.3
1,615,762	-		MMJJ_RS08765	0.49	-1.4
1,615,764	-		MMJJ_RS08765	0.50	-0.4
1,615,765	+		MMJJ_RS08765	0.50	-1.0
1,615,765	+		MMJJ_RS08765	0.50	-2.3
1,615,792	+		MMJJ_RS08765	0.52	-1.5
1,615,793	-		MMJJ_RS08765	0.52	+0.1
1,615,793	-		MMJJ_RS08765	0.52	-0.1
1,615,793	-		MMJJ_RS08765	0.52	-1.3
1,615,794	+		MMJJ_RS08765	0.52	+0.8
1,615,846	-		MMJJ_RS08765	0.57	+1.5
1,615,847	+		MMJJ_RS08765	0.57	-1.7
1,615,912	+		MMJJ_RS08765	0.62	-0.6
1,615,964	+		MMJJ_RS08765	0.67	-1.0
1,615,975	-		MMJJ_RS08765	0.68	-0.8
1,615,976	+		MMJJ_RS08765	0.68	-1.1
1,615,976	+		MMJJ_RS08765	0.68	-0.3
1,615,995	-		MMJJ_RS08765	0.70	-1.5
1,615,995	-		MMJJ_RS08765	0.70	-0.7
1,615,996	+		MMJJ_RS08765	0.70	-1.2
1,616,001	-		MMJJ_RS08765	0.70	+0.6
1,616,002	+		MMJJ_RS08765	0.70	+0.2
1,616,006	+		MMJJ_RS08765	0.71	-0.1
1,616,114	+		MMJJ_RS08765	0.80	+0.2
1,616,123	+		MMJJ_RS08765	0.81	-2.0
1,616,128	+		MMJJ_RS08765	0.81	-1.4
1,616,128	+		MMJJ_RS08765	0.81	+2.0
1,616,128	+		MMJJ_RS08765	0.81	+0.1
1,616,160	+		MMJJ_RS08765	0.84	+0.6
1,616,172	-		MMJJ_RS08765	0.85	-0.8
1,616,183	+		MMJJ_RS08765	0.86	+0.6
1,616,218	+		MMJJ_RS08765	0.89	-0.1
1,616,218	+		MMJJ_RS08765	0.89	-2.4
1,616,221	+		MMJJ_RS08765	0.89	-0.3
1,616,221	+		MMJJ_RS08765	0.89	-1.0
1,616,227	-		MMJJ_RS08765	0.90	-1.0
1,616,228	+				-1.0
1,616,229	-				+1.4
1,616,230	+				-0.2
1,616,230	+				-0.8
1,616,232	-				-1.5
1,616,290	+				-1.5
1,616,292	-				-0.3
1,616,307	+				-0.3
1,616,344	+				-1.4
1,616,365	-				-1.1
1,616,385	+				-2.7
1,616,425	-		MMJJ_RS08770	0.15	-2.6
1,616,440	-		MMJJ_RS08770	0.18	+0.1
1,616,440	-		MMJJ_RS08770	0.18	-1.8
1,616,542	+		MMJJ_RS08770	0.38	-2.1
1,616,542	+		MMJJ_RS08770	0.38	-1.1
1,616,542	+		MMJJ_RS08770	0.38	-1.0
1,616,544	+		MMJJ_RS08770	0.39	-0.5
1,616,603	-		MMJJ_RS08770	0.50	-1.3
1,616,604	+		MMJJ_RS08770	0.50	-1.0
1,616,635	-		MMJJ_RS08770	0.57	-0.2
1,616,635	-		MMJJ_RS08770	0.57	-0.0
1,616,636	+		MMJJ_RS08770	0.57	-1.4
1,616,652	+		MMJJ_RS08770	0.60	+1.3
1,616,673	+		MMJJ_RS08770	0.64	-0.6
1,616,675	+		MMJJ_RS08770	0.64	-0.4
1,616,714	-		MMJJ_RS08770	0.72	+1.4
1,616,714	-		MMJJ_RS08770	0.72	-1.5
1,616,714	-		MMJJ_RS08770	0.72	-0.5
1,616,715	+		MMJJ_RS08770	0.72	+0.4
1,616,718	-		MMJJ_RS08770	0.73	+0.1
1,616,794	+		MMJJ_RS08770	0.88	-1.6
1,616,849	+				-0.4
1,616,859	+				-0.1
1,616,877	-				+0.8
1,616,877	-				-0.9
1,616,884	+				-0.4
1,616,949	-		MMJJ_RS08775	0.11	-0.8
1,616,949	-				+2.4
1,616,950	+		MMJJ_RS08775	0.11	+0.8
1,616,950	+		MMJJ_RS08775	0.11	-1.3
1,616,950	+		MMJJ_RS08775	0.11	-0.8
1,616,952	-		MMJJ_RS08775	0.11	+0.2
1,616,952	-		MMJJ_RS08775	0.11	-1.8
1,616,953	+		MMJJ_RS08775	0.12	-2.2
1,616,966	-		MMJJ_RS08775	0.13	+0.9
1,616,970	-		MMJJ_RS08775	0.13	-1.2
1,617,015	-		MMJJ_RS08775	0.18	-0.3
1,617,015	-		MMJJ_RS08775	0.18	-1.5
1,617,016	+		MMJJ_RS08775	0.18	-2.2
1,617,016	+		MMJJ_RS08775	0.18	+0.4
1,617,016	+		MMJJ_RS08775	0.18	+0.1
1,617,033	-		MMJJ_RS08775	0.20	+0.6
1,617,034	+		MMJJ_RS08775	0.20	-0.0
1,617,047	-		MMJJ_RS08775	0.22	-0.8
1,617,047	-		MMJJ_RS08775	0.22	+8.9
1,617,047	-		MMJJ_RS08775	0.22	+1.8
1,617,047	-		MMJJ_RS08775	0.22	-0.8
1,617,048	+		MMJJ_RS08775	0.22	-2.0
1,617,048	+		MMJJ_RS08775	0.22	+1.5
1,617,076	+		MMJJ_RS08775	0.25	-1.8
1,617,098	-		MMJJ_RS08775	0.27	-0.3
1,617,098	-		MMJJ_RS08775	0.27	+1.1
1,617,098	-		MMJJ_RS08775	0.27	-1.6
1,617,172	+		MMJJ_RS08775	0.35	-1.3
1,617,172	+		MMJJ_RS08775	0.35	-0.6
1,617,236	-		MMJJ_RS08775	0.42	+0.4
1,617,237	+		MMJJ_RS08775	0.42	-1.8
1,617,238	-		MMJJ_RS08775	0.42	-0.9
1,617,238	-				+0.8
1,617,238	-		MMJJ_RS08775	0.42	+0.6
1,617,238	-		MMJJ_RS08775	0.42	-0.1
1,617,238	-		MMJJ_RS08775	0.42	-1.7
1,617,238	-		MMJJ_RS08775	0.42	-1.0
1,617,238	-		MMJJ_RS08775	0.42	-1.3
1,617,238	-		MMJJ_RS08775	0.42	+2.4
1,617,239	+		MMJJ_RS08775	0.43	-1.4
1,617,239	+		MMJJ_RS08775	0.43	-0.3
1,617,239	+		MMJJ_RS08775	0.43	-1.3
1,617,239	+		MMJJ_RS08775	0.43	-0.8
1,617,239	+		MMJJ_RS08775	0.43	-0.8
1,617,239	+		MMJJ_RS08775	0.43	+0.8
1,617,239	+		MMJJ_RS08775	0.43	+0.2
1,617,242	-		MMJJ_RS08775	0.43	-1.5
1,617,242	-		MMJJ_RS08775	0.43	-1.8
1,617,242	-		MMJJ_RS08775	0.43	+0.2
1,617,242	-		MMJJ_RS08775	0.43	-1.5
1,617,242	-		MMJJ_RS08775	0.43	+2.4
1,617,243	+		MMJJ_RS08775	0.43	+0.6
1,617,243	+		MMJJ_RS08775	0.43	-0.8
1,617,243	+		MMJJ_RS08775	0.43	-1.5
1,617,279	+		MMJJ_RS08775	0.47	+1.2
1,617,296	-		MMJJ_RS08775	0.49	-0.1
1,617,337	-		MMJJ_RS08775	0.53	-0.1
1,617,370	+		MMJJ_RS08775	0.57	+0.1
1,617,390	-		MMJJ_RS08775	0.59	+1.6
1,617,404	-		MMJJ_RS08775	0.60	+0.3
1,617,405	+		MMJJ_RS08775	0.61	-1.2
1,617,405	+		MMJJ_RS08775	0.61	+0.5
1,617,405	+		MMJJ_RS08775	0.61	+0.7
1,617,511	+		MMJJ_RS08775	0.72	-1.5
1,617,520	-		MMJJ_RS08775	0.73	+2.2
1,617,521	+		MMJJ_RS08775	0.73	-1.1
1,617,525	-		MMJJ_RS08775	0.74	+0.6
1,617,525	-		MMJJ_RS08775	0.74	-0.8
1,617,526	+		MMJJ_RS08775	0.74	-1.5
1,617,526	+		MMJJ_RS08775	0.74	+2.0
1,617,528	+		MMJJ_RS08775	0.74	+1.3
1,617,576	-		MMJJ_RS08775	0.79	-0.8
1,617,591	+		MMJJ_RS08775	0.81	-1.3
1,617,705	-				-1.2
1,617,705	-				-0.1
1,617,724	-				+1.1
1,617,724	-				-0.6
1,617,728	-				+0.8
1,617,729	+				-0.5
1,617,729	+				-2.9
1,617,729	+				+5.1
1,617,729	+				-0.8
1,617,729	+				-0.2
1,617,731	+				-1.0
1,617,735	+				-1.5
1,617,735	+				-0.9
1,617,744	-				+0.8
1,617,745	+				+0.6
1,617,793	-				+1.8
1,617,820	-		MMJJ_RS08780	0.11	-1.7
1,617,820	-		MMJJ_RS08780	0.11	+0.0
1,617,821	+		MMJJ_RS08780	0.11	+1.0
1,617,821	+		MMJJ_RS08780	0.11	-1.4
1,617,824	+		MMJJ_RS08780	0.12	+0.8
1,617,830	+		MMJJ_RS08780	0.13	+0.4
1,617,851	-		MMJJ_RS08780	0.17	+0.0
1,617,852	+		MMJJ_RS08780	0.18	-1.5