Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS06165

Experiment: H2 N-free with 2mM Adenosine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	H2 N-free with 2mM Adenosine
1,142,130	+		MMJJ_RS06155	0.40	+0.8
1,142,191	-		MMJJ_RS06155	0.52	+0.0
1,142,192	+		MMJJ_RS06155	0.52	-0.2
1,142,192	+		MMJJ_RS06155	0.52	-0.4
1,142,211	-		MMJJ_RS06155	0.56	+0.0
1,142,266	-		MMJJ_RS06155	0.67	-0.7
1,142,295	-		MMJJ_RS06155	0.73	-0.1
1,142,303	-				+0.3
1,142,304	+		MMJJ_RS06155	0.75	-1.1
1,142,304	+		MMJJ_RS06155	0.75	-0.9
1,142,487	-				+2.5
1,142,498	+				+0.0
1,142,557	+		MMJJ_RS06160	0.19	-0.7
1,142,560	-				+1.0
1,142,561	+		MMJJ_RS06160	0.20	+1.6
1,142,568	+		MMJJ_RS06160	0.21	-1.8
1,142,606	-		MMJJ_RS06160	0.27	+0.4
1,142,650	-		MMJJ_RS06160	0.35	-1.4
1,142,690	+		MMJJ_RS06160	0.42	-0.7
1,142,710	-		MMJJ_RS06160	0.45	+1.1
1,142,710	-		MMJJ_RS06160	0.45	-0.7
1,142,714	-		MMJJ_RS06160	0.46	-2.2
1,142,714	-		MMJJ_RS06160	0.46	-0.4
1,142,714	-		MMJJ_RS06160	0.46	+1.0
1,142,714	-		MMJJ_RS06160	0.46	+0.5
1,142,714	-		MMJJ_RS06160	0.46	-1.6
1,142,715	+		MMJJ_RS06160	0.46	-1.2
1,142,715	+		MMJJ_RS06160	0.46	-0.6
1,142,715	+		MMJJ_RS06160	0.46	-0.5
1,142,715	+		MMJJ_RS06160	0.46	-0.4
1,142,715	+		MMJJ_RS06160	0.46	+1.8
1,142,716	-		MMJJ_RS06160	0.46	-1.7
1,142,716	-		MMJJ_RS06160	0.46	+2.3
1,142,717	+		MMJJ_RS06160	0.46	-0.8
1,142,717	+		MMJJ_RS06160	0.46	-1.4
1,142,717	+		MMJJ_RS06160	0.46	-1.7
1,142,717	+		MMJJ_RS06160	0.46	+0.0
1,142,717	+		MMJJ_RS06160	0.46	-1.2
1,142,717	+		MMJJ_RS06160	0.46	-0.1
1,142,717	+		MMJJ_RS06160	0.46	-0.2
1,142,717	+		MMJJ_RS06160	0.46	-0.4
1,142,722	-		MMJJ_RS06160	0.47	-0.5
1,142,723	+		MMJJ_RS06160	0.47	-0.7
1,142,723	+		MMJJ_RS06160	0.47	-0.1
1,142,723	+		MMJJ_RS06160	0.47	-1.6
1,142,723	+		MMJJ_RS06160	0.47	+0.7
1,142,737	-		MMJJ_RS06160	0.50	-0.3
1,142,740	+		MMJJ_RS06160	0.50	+0.8
1,142,740	+		MMJJ_RS06160	0.50	-0.7
1,142,740	+		MMJJ_RS06160	0.50	+0.3
1,142,740	+		MMJJ_RS06160	0.50	-1.0
1,142,752	+		MMJJ_RS06160	0.52	-0.7
1,142,772	+		MMJJ_RS06160	0.55	+0.3
1,142,812	+		MMJJ_RS06160	0.62	-0.2
1,142,861	+		MMJJ_RS06160	0.71	+0.8
1,142,874	-		MMJJ_RS06160	0.73	-2.1
1,142,887	-		MMJJ_RS06160	0.75	-0.7
1,142,888	+		MMJJ_RS06160	0.75	+1.6
1,142,888	+		MMJJ_RS06160	0.75	-1.2
1,142,890	+		MMJJ_RS06160	0.75	-0.2
1,142,890	+		MMJJ_RS06160	0.75	-0.2
1,142,927	-		MMJJ_RS06160	0.82	+1.0
1,142,967	-		MMJJ_RS06160	0.88	+1.6
1,142,967	-		MMJJ_RS06160	0.88	+1.6
1,142,970	-		MMJJ_RS06160	0.89	-2.5
1,142,971	+		MMJJ_RS06160	0.89	-0.6
1,142,971	+		MMJJ_RS06160	0.89	+1.7
1,142,976	-				+1.2
1,142,991	-				+0.1
1,142,991	-				-0.7
1,142,997	-				-0.4
1,142,997	-				-1.2
1,142,997	-				-1.7
1,143,003	-				+0.8
1,143,004	+				-0.5
1,143,015	-				-0.6
1,143,015	-				-0.8
1,143,015	-				+0.0
1,143,016	+				+1.0
1,143,022	-				-1.6
1,143,028	+				-2.3
1,143,028	+				+0.3
1,143,032	-				-1.4
1,143,035	-				-2.3
1,143,041	+				-0.4
1,143,041	+				-1.7
1,143,041	+				-2.4
1,143,050	-				-1.5
1,143,051	+				-0.7
1,143,111	-				-0.7
1,143,118	-				-0.7
1,143,127	-				-0.4
1,143,132	-				-0.8
1,143,132	-				-1.0
1,143,133	+				-0.7
1,143,139	-				-0.9
1,143,140	+				-0.2
1,143,300	-		MMJJ_RS06165	0.12	-0.5
1,143,388	+		MMJJ_RS06165	0.17	+0.3
1,143,413	+		MMJJ_RS06165	0.18	-0.5
1,143,451	-		MMJJ_RS06165	0.21	+1.8
1,143,482	+		MMJJ_RS06165	0.23	-1.3
1,143,482	+		MMJJ_RS06165	0.23	+1.0
1,143,483	-		MMJJ_RS06165	0.23	+1.2
1,143,540	-		MMJJ_RS06165	0.26	-3.3
1,143,549	-		MMJJ_RS06165	0.27	-0.6
1,143,564	-		MMJJ_RS06165	0.28	+0.2
1,143,565	+		MMJJ_RS06165	0.28	-0.4
1,143,565	+		MMJJ_RS06165	0.28	+0.0
1,143,567	-		MMJJ_RS06165	0.28	-1.4
1,143,568	+		MMJJ_RS06165	0.28	-0.9
1,143,583	+		MMJJ_RS06165	0.29	-0.4
1,143,608	+				+2.3
1,143,634	-		MMJJ_RS06165	0.32	+1.3
1,143,654	+		MMJJ_RS06165	0.33	-1.0
1,143,671	+		MMJJ_RS06165	0.34	-2.9
1,143,679	-		MMJJ_RS06165	0.35	-1.4
1,143,680	+		MMJJ_RS06165	0.35	+0.0
1,143,771	+		MMJJ_RS06165	0.41	+0.4
1,143,782	-		MMJJ_RS06165	0.41	-0.1
1,143,783	+		MMJJ_RS06165	0.41	-1.4
1,143,788	-		MMJJ_RS06165	0.42	+0.0
1,143,815	+		MMJJ_RS06165	0.43	+0.2
1,143,858	-		MMJJ_RS06165	0.46	-1.1
1,143,859	+		MMJJ_RS06165	0.46	-1.8
1,143,890	-		MMJJ_RS06165	0.48	-1.4
1,143,890	-		MMJJ_RS06165	0.48	-1.9
1,143,891	+		MMJJ_RS06165	0.48	-1.0
1,143,891	+		MMJJ_RS06165	0.48	-0.9
1,143,899	+		MMJJ_RS06165	0.49	-0.7
1,143,899	+		MMJJ_RS06165	0.49	+0.7
1,143,899	+		MMJJ_RS06165	0.49	-0.0
1,143,904	-		MMJJ_RS06165	0.49	-0.4
1,143,905	+		MMJJ_RS06165	0.49	-2.0
1,143,940	+		MMJJ_RS06165	0.51	-2.4
1,143,964	-		MMJJ_RS06165	0.53	+0.3
1,143,975	+		MMJJ_RS06165	0.53	-1.1
1,143,995	+		MMJJ_RS06165	0.54	+0.3
1,144,009	-		MMJJ_RS06165	0.55	+0.5
1,144,027	-		MMJJ_RS06165	0.56	+1.8
1,144,109	+		MMJJ_RS06165	0.62	+1.0
1,144,128	-				+1.8
1,144,128	-		MMJJ_RS06165	0.63	-2.4
1,144,128	-		MMJJ_RS06165	0.63	+1.3
1,144,129	+		MMJJ_RS06165	0.63	-2.5
1,144,162	-		MMJJ_RS06165	0.65	-1.2
1,144,163	+		MMJJ_RS06165	0.65	-1.7
1,144,168	-				+1.8
1,144,169	+		MMJJ_RS06165	0.65	-0.2
1,144,169	+		MMJJ_RS06165	0.65	+0.0
1,144,169	+		MMJJ_RS06165	0.65	-1.2
1,144,171	-		MMJJ_RS06165	0.65	-1.7
1,144,171	-		MMJJ_RS06165	0.65	-0.4
1,144,191	-		MMJJ_RS06165	0.67	-1.9
1,144,192	+		MMJJ_RS06165	0.67	-0.7
1,144,222	+		MMJJ_RS06165	0.69	+0.5
1,144,222	+		MMJJ_RS06165	0.69	-1.7
1,144,225	-		MMJJ_RS06165	0.69	-0.6
1,144,225	-		MMJJ_RS06165	0.69	+2.3
1,144,225	-		MMJJ_RS06165	0.69	+0.0
1,144,226	+		MMJJ_RS06165	0.69	-1.1
1,144,396	-		MMJJ_RS06165	0.79	+1.3
1,144,396	-		MMJJ_RS06165	0.79	-1.4
1,144,397	+		MMJJ_RS06165	0.79	+0.3
1,144,402	-		MMJJ_RS06165	0.80	+1.3
1,144,403	+		MMJJ_RS06165	0.80	+0.0
1,144,430	+		MMJJ_RS06165	0.81	-0.7
1,144,489	-		MMJJ_RS06165	0.85	-1.4
1,144,531	-		MMJJ_RS06165	0.88	-1.8
1,144,545	+		MMJJ_RS06165	0.88	-1.0
1,144,564	-		MMJJ_RS06165	0.90	+1.0
1,144,564	-		MMJJ_RS06165	0.90	+0.2
1,144,618	-				-0.9
1,144,619	+				+0.5
1,144,623	+				-0.8
1,144,713	+				-2.5
1,144,713	+				-0.5
1,144,728	-				-2.0
1,144,741	+				-0.9
1,144,745	+				-1.8
1,144,799	+				+0.5
1,144,838	-				-1.1
1,144,891	-		MMJJ_RS06170	0.19	+0.2
1,144,903	-		MMJJ_RS06170	0.21	+0.7
1,144,903	-		MMJJ_RS06170	0.21	+0.0
1,144,904	+		MMJJ_RS06170	0.21	+0.6
1,144,904	+		MMJJ_RS06170	0.21	-0.7
1,144,904	+		MMJJ_RS06170	0.21	+0.5
1,144,904	+		MMJJ_RS06170	0.21	-1.2
1,144,913	-				+1.7
1,144,913	-		MMJJ_RS06170	0.23	-0.8
1,144,914	+		MMJJ_RS06170	0.23	-0.8
1,144,959	+		MMJJ_RS06170	0.31	-0.1
1,144,982	-		MMJJ_RS06170	0.36	-0.4
1,145,002	-		MMJJ_RS06170	0.39	-0.4
1,145,002	-		MMJJ_RS06170	0.39	-0.6
1,145,003	+		MMJJ_RS06170	0.39	+0.0
1,145,003	+		MMJJ_RS06170	0.39	-1.5
1,145,016	+		MMJJ_RS06170	0.42	-1.0
1,145,046	+		MMJJ_RS06170	0.47	-0.6
1,145,127	-		MMJJ_RS06170	0.62	-0.5
1,145,145	-		MMJJ_RS06170	0.66	-1.3
1,145,147	-				+1.7
1,145,147	-		MMJJ_RS06170	0.66	+0.5
1,145,147	-		MMJJ_RS06170	0.66	+1.3
1,145,147	-		MMJJ_RS06170	0.66	-1.3
1,145,148	+		MMJJ_RS06170	0.66	-0.1
1,145,148	+		MMJJ_RS06170	0.66	-0.4
1,145,148	+		MMJJ_RS06170	0.66	-0.8
1,145,148	+		MMJJ_RS06170	0.66	-0.3
1,145,148	+		MMJJ_RS06170	0.66	-1.3
1,145,148	+		MMJJ_RS06170	0.66	+0.3
1,145,148	+		MMJJ_RS06170	0.66	-0.7
1,145,148	+		MMJJ_RS06170	0.66	-0.8
1,145,149	-		MMJJ_RS06170	0.66	-1.1
1,145,149	-		MMJJ_RS06170	0.66	-0.1
1,145,149	-		MMJJ_RS06170	0.66	+0.9
1,145,149	-		MMJJ_RS06170	0.66	+0.7
1,145,149	-		MMJJ_RS06170	0.66	-0.3
1,145,149	-		MMJJ_RS06170	0.66	-1.0
1,145,149	-		MMJJ_RS06170	0.66	+0.7
1,145,149	-		MMJJ_RS06170	0.66	+0.7
1,145,150	+		MMJJ_RS06170	0.66	-0.7
1,145,150	+		MMJJ_RS06170	0.66	-0.7
1,145,150	+		MMJJ_RS06170	0.66	+0.3
1,145,150	+		MMJJ_RS06170	0.66	-0.7
1,145,150	+		MMJJ_RS06170	0.66	+1.3
1,145,150	+		MMJJ_RS06170	0.66	+0.5
1,145,150	+		MMJJ_RS06170	0.66	-1.3
1,145,150	+		MMJJ_RS06170	0.66	-1.0
1,145,150	+		MMJJ_RS06170	0.66	-0.7
1,145,150	+		MMJJ_RS06170	0.66	-1.6
1,145,150	+		MMJJ_RS06170	0.66	-2.1
1,145,150	+		MMJJ_RS06170	0.66	-0.4
1,145,155	+		MMJJ_RS06170	0.67	+0.2
1,145,155	+				+1.7
1,145,263	-		MMJJ_RS06170	0.87	+0.3
1,145,264	+		MMJJ_RS06170	0.87	-0.7
1,145,301	-				+1.0
1,145,309	+				-2.1
1,145,309	+				-0.3
1,145,330	+				-0.5
1,145,330	+				-1.2
1,145,507	-		MMJJ_RS06175	0.18	+2.3
1,145,678	+				+1.3