Experiment: H2 N-free with 2mM Adenosine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS01550 and MMJJ_RS01555 are separated by 367 nucleotides MMJJ_RS01555 and MMJJ_RS01560 are separated by 62 nucleotides MMJJ_RS01560 and MMJJ_RS01565 are separated by 43 nucleotides
MMJJ_RS01550: MMJJ_RS01550 - 30S ribosomal protein S2, at 301,388 to 302,050
_RS01550
MMJJ_RS01555: MMJJ_RS01555 - Na/Pi cotransporter family protein, at 302,418 to 304,043
_RS01555
MMJJ_RS01560: MMJJ_RS01560 - DUF2115 domain-containing protein, at 304,106 to 304,594
_RS01560
MMJJ_RS01565: MMJJ_RS01565 - TIGR00267 family protein, at 304,638 to 305,198
_RS01565
Position (kb) 302
303
304
305 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5
6
7
8 at 302.237 kb on - strand at 302.237 kb on - strand at 302.237 kb on - strand at 302.237 kb on - strand at 302.237 kb on - strand at 302.237 kb on - strand at 302.238 kb on + strand at 302.238 kb on + strand at 302.241 kb on - strand at 302.241 kb on - strand at 302.264 kb on + strand at 302.267 kb on - strand at 302.267 kb on - strand at 302.286 kb on + strand at 302.291 kb on - strand at 302.292 kb on + strand at 302.299 kb on - strand at 302.365 kb on + strand at 302.365 kb on + strand at 302.375 kb on - strand at 302.376 kb on + strand at 302.379 kb on + strand at 302.402 kb on - strand at 302.404 kb on - strand at 302.405 kb on + strand at 302.405 kb on + strand at 302.405 kb on + strand at 302.433 kb on + strand at 302.433 kb on + strand at 302.433 kb on + strand at 302.433 kb on + strand at 302.433 kb on + strand at 302.435 kb on + strand at 302.435 kb on + strand at 302.470 kb on + strand at 302.521 kb on - strand at 302.622 kb on + strand, within MMJJ_RS01555 at 302.824 kb on - strand, within MMJJ_RS01555 at 302.842 kb on - strand, within MMJJ_RS01555 at 302.843 kb on + strand, within MMJJ_RS01555 at 302.872 kb on - strand, within MMJJ_RS01555 at 302.875 kb on - strand, within MMJJ_RS01555 at 302.876 kb on + strand, within MMJJ_RS01555 at 302.969 kb on - strand, within MMJJ_RS01555 at 302.969 kb on - strand, within MMJJ_RS01555 at 302.970 kb on + strand, within MMJJ_RS01555 at 303.031 kb on - strand, within MMJJ_RS01555 at 303.031 kb on - strand, within MMJJ_RS01555 at 303.032 kb on + strand, within MMJJ_RS01555 at 303.056 kb on + strand, within MMJJ_RS01555 at 303.058 kb on - strand at 303.058 kb on - strand, within MMJJ_RS01555 at 303.058 kb on - strand, within MMJJ_RS01555 at 303.104 kb on - strand, within MMJJ_RS01555 at 303.105 kb on + strand, within MMJJ_RS01555 at 303.105 kb on + strand, within MMJJ_RS01555 at 303.159 kb on + strand, within MMJJ_RS01555 at 303.161 kb on - strand, within MMJJ_RS01555 at 303.162 kb on + strand, within MMJJ_RS01555 at 303.172 kb on - strand, within MMJJ_RS01555 at 303.175 kb on - strand, within MMJJ_RS01555 at 303.205 kb on - strand, within MMJJ_RS01555 at 303.227 kb on + strand, within MMJJ_RS01555 at 303.236 kb on - strand, within MMJJ_RS01555 at 303.293 kb on - strand, within MMJJ_RS01555 at 303.293 kb on - strand, within MMJJ_RS01555 at 303.293 kb on - strand, within MMJJ_RS01555 at 303.294 kb on + strand, within MMJJ_RS01555 at 303.294 kb on + strand, within MMJJ_RS01555 at 303.295 kb on - strand, within MMJJ_RS01555 at 303.296 kb on + strand, within MMJJ_RS01555 at 303.340 kb on - strand, within MMJJ_RS01555 at 303.371 kb on - strand, within MMJJ_RS01555 at 303.372 kb on + strand, within MMJJ_RS01555 at 303.372 kb on + strand, within MMJJ_RS01555 at 303.379 kb on - strand, within MMJJ_RS01555 at 303.481 kb on - strand, within MMJJ_RS01555 at 303.481 kb on - strand, within MMJJ_RS01555 at 303.505 kb on - strand, within MMJJ_RS01555 at 303.505 kb on - strand, within MMJJ_RS01555 at 303.505 kb on - strand, within MMJJ_RS01555 at 303.506 kb on + strand, within MMJJ_RS01555 at 303.589 kb on - strand, within MMJJ_RS01555 at 303.589 kb on - strand, within MMJJ_RS01555 at 303.648 kb on + strand, within MMJJ_RS01555 at 303.649 kb on - strand, within MMJJ_RS01555 at 303.649 kb on - strand, within MMJJ_RS01555 at 303.650 kb on + strand, within MMJJ_RS01555 at 303.653 kb on - strand, within MMJJ_RS01555 at 303.659 kb on - strand, within MMJJ_RS01555 at 303.660 kb on + strand, within MMJJ_RS01555 at 303.660 kb on + strand, within MMJJ_RS01555 at 303.660 kb on + strand, within MMJJ_RS01555 at 303.701 kb on + strand, within MMJJ_RS01555 at 303.701 kb on + strand, within MMJJ_RS01555 at 303.701 kb on + strand, within MMJJ_RS01555 at 303.701 kb on + strand, within MMJJ_RS01555 at 303.718 kb on - strand, within MMJJ_RS01555 at 303.741 kb on + strand, within MMJJ_RS01555 at 303.780 kb on + strand, within MMJJ_RS01555 at 303.785 kb on + strand, within MMJJ_RS01555 at 303.787 kb on - strand, within MMJJ_RS01555 at 303.788 kb on + strand, within MMJJ_RS01555 at 303.788 kb on + strand, within MMJJ_RS01555 at 303.797 kb on + strand, within MMJJ_RS01555 at 303.808 kb on - strand, within MMJJ_RS01555 at 303.809 kb on + strand, within MMJJ_RS01555 at 303.850 kb on - strand, within MMJJ_RS01555 at 304.051 kb on - strand at 304.087 kb on - strand at 304.087 kb on - strand at 304.088 kb on + strand at 304.088 kb on + strand at 304.127 kb on + strand at 304.498 kb on - strand, within MMJJ_RS01560 at 304.551 kb on - strand at 304.620 kb on - strand at 304.620 kb on - strand at 304.628 kb on - strand at 304.628 kb on - strand at 304.628 kb on - strand at 304.628 kb on - strand at 304.629 kb on + strand at 304.629 kb on + strand at 304.631 kb on - strand at 304.635 kb on - strand at 304.635 kb on - strand at 304.636 kb on + strand at 304.636 kb on + strand at 304.636 kb on + strand at 304.648 kb on + strand at 304.786 kb on + strand, within MMJJ_RS01565 at 304.820 kb on - strand, within MMJJ_RS01565 at 304.873 kb on - strand, within MMJJ_RS01565 at 304.874 kb on + strand, within MMJJ_RS01565 at 304.874 kb on + strand, within MMJJ_RS01565 at 304.886 kb on + strand, within MMJJ_RS01565 at 304.987 kb on + strand, within MMJJ_RS01565 at 305.016 kb on - strand, within MMJJ_RS01565 at 305.018 kb on - strand, within MMJJ_RS01565 at 305.025 kb on - strand, within MMJJ_RS01565 at 305.027 kb on - strand, within MMJJ_RS01565
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 2mM Adenosine remove 302,237 - -0.1 302,237 - -0.5 302,237 - -1.6 302,237 - -1.4 302,237 - -1.3 302,237 - -0.3 302,238 + -0.2 302,238 + -0.6 302,241 - -2.2 302,241 - +1.1 302,264 + -0.5 302,267 - +1.0 302,267 - -0.2 302,286 + +0.5 302,291 - -2.1 302,292 + -1.0 302,299 - +0.3 302,365 + -2.0 302,365 + +0.5 302,375 - -3.0 302,376 + -2.2 302,379 + -2.0 302,402 - -2.2 302,404 - -1.0 302,405 + -2.1 302,405 + +1.5 302,405 + +0.0 302,433 + -1.3 302,433 + +1.3 302,433 + -0.3 302,433 + -0.2 302,433 + +1.2 302,435 + -0.8 302,435 + -2.3 302,470 + -3.6 302,521 - -2.6 302,622 + MMJJ_RS01555 0.13 +0.6 302,824 - MMJJ_RS01555 0.25 -2.0 302,842 - MMJJ_RS01555 0.26 -0.6 302,843 + MMJJ_RS01555 0.26 -1.2 302,872 - MMJJ_RS01555 0.28 -1.3 302,875 - MMJJ_RS01555 0.28 -2.3 302,876 + MMJJ_RS01555 0.28 -0.8 302,969 - MMJJ_RS01555 0.34 -3.8 302,969 - MMJJ_RS01555 0.34 -1.5 302,970 + MMJJ_RS01555 0.34 -1.0 303,031 - MMJJ_RS01555 0.38 -0.9 303,031 - MMJJ_RS01555 0.38 -1.0 303,032 + MMJJ_RS01555 0.38 -2.3 303,056 + MMJJ_RS01555 0.39 -1.6 303,058 - +1.3 303,058 - MMJJ_RS01555 0.39 -0.4 303,058 - MMJJ_RS01555 0.39 -1.3 303,104 - MMJJ_RS01555 0.42 -2.4 303,105 + MMJJ_RS01555 0.42 -1.0 303,105 + MMJJ_RS01555 0.42 -2.1 303,159 + MMJJ_RS01555 0.46 +0.3 303,161 - MMJJ_RS01555 0.46 +0.1 303,162 + MMJJ_RS01555 0.46 -3.2 303,172 - MMJJ_RS01555 0.46 -0.1 303,175 - MMJJ_RS01555 0.47 -2.3 303,205 - MMJJ_RS01555 0.48 -3.3 303,227 + MMJJ_RS01555 0.50 -2.4 303,236 - MMJJ_RS01555 0.50 +1.1 303,293 - MMJJ_RS01555 0.54 -3.1 303,293 - MMJJ_RS01555 0.54 -1.8 303,293 - MMJJ_RS01555 0.54 -0.3 303,294 + MMJJ_RS01555 0.54 +0.2 303,294 + MMJJ_RS01555 0.54 +0.2 303,295 - MMJJ_RS01555 0.54 -2.1 303,296 + MMJJ_RS01555 0.54 +0.1 303,340 - MMJJ_RS01555 0.57 -1.7 303,371 - MMJJ_RS01555 0.59 -1.2 303,372 + MMJJ_RS01555 0.59 +0.6 303,372 + MMJJ_RS01555 0.59 -1.6 303,379 - MMJJ_RS01555 0.59 +0.4 303,481 - MMJJ_RS01555 0.65 -1.9 303,481 - MMJJ_RS01555 0.65 -1.2 303,505 - MMJJ_RS01555 0.67 -0.7 303,505 - MMJJ_RS01555 0.67 -0.4 303,505 - MMJJ_RS01555 0.67 +0.2 303,506 + MMJJ_RS01555 0.67 -1.0 303,589 - MMJJ_RS01555 0.72 -1.1 303,589 - MMJJ_RS01555 0.72 +0.5 303,648 + MMJJ_RS01555 0.76 -0.1 303,649 - MMJJ_RS01555 0.76 -0.7 303,649 - MMJJ_RS01555 0.76 +0.1 303,650 + MMJJ_RS01555 0.76 -2.8 303,653 - MMJJ_RS01555 0.76 -1.4 303,659 - MMJJ_RS01555 0.76 -1.8 303,660 + MMJJ_RS01555 0.76 -1.6 303,660 + MMJJ_RS01555 0.76 -0.3 303,660 + MMJJ_RS01555 0.76 -1.2 303,701 + MMJJ_RS01555 0.79 -1.9 303,701 + MMJJ_RS01555 0.79 -1.8 303,701 + MMJJ_RS01555 0.79 +0.9 303,701 + MMJJ_RS01555 0.79 -2.5 303,718 - MMJJ_RS01555 0.80 +0.3 303,741 + MMJJ_RS01555 0.81 -1.2 303,780 + MMJJ_RS01555 0.84 -2.0 303,785 + MMJJ_RS01555 0.84 -1.9 303,787 - MMJJ_RS01555 0.84 +0.4 303,788 + MMJJ_RS01555 0.84 -1.0 303,788 + MMJJ_RS01555 0.84 -0.5 303,797 + MMJJ_RS01555 0.85 -0.1 303,808 - MMJJ_RS01555 0.85 -0.7 303,809 + MMJJ_RS01555 0.86 -2.9 303,850 - MMJJ_RS01555 0.88 -1.0 304,051 - -0.9 304,087 - +0.3 304,087 - -0.3 304,088 + -0.0 304,088 + -0.6 304,127 + +0.1 304,498 - MMJJ_RS01560 0.80 +1.7 304,551 - -0.1 304,620 - -1.8 304,620 - +1.7 304,628 - -1.1 304,628 - -1.1 304,628 - -1.4 304,628 - +2.7 304,629 + -1.2 304,629 + -1.6 304,631 - -0.3 304,635 - -0.3 304,635 - +8.3 304,636 + +0.7 304,636 + +1.4 304,636 + +2.0 304,648 + +0.7 304,786 + MMJJ_RS01565 0.26 +0.7 304,820 - MMJJ_RS01565 0.32 -1.0 304,873 - MMJJ_RS01565 0.42 -1.9 304,874 + MMJJ_RS01565 0.42 -0.7 304,874 + MMJJ_RS01565 0.42 -1.2 304,886 + MMJJ_RS01565 0.44 -1.0 304,987 + MMJJ_RS01565 0.62 -0.6 305,016 - MMJJ_RS01565 0.67 -2.5 305,018 - MMJJ_RS01565 0.68 -1.3 305,025 - MMJJ_RS01565 0.69 +0.7 305,027 - MMJJ_RS01565 0.69 +1.0
Or see this region's nucleotide sequence