Experiment: H2 N-free with 2mM Adenosine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS01510 and MMJJ_RS01515 are separated by 130 nucleotides MMJJ_RS01515 and MMJJ_RS01520 are separated by 10 nucleotides MMJJ_RS01520 and MMJJ_RS01525 are separated by 14 nucleotides
MMJJ_RS01510: MMJJ_RS01510 - ATP-binding protein, at 295,702 to 297,099
_RS01510
MMJJ_RS01515: MMJJ_RS01515 - DUF2178 domain-containing protein, at 297,230 to 297,616
_RS01515
MMJJ_RS01520: MMJJ_RS01520 - helix-turn-helix transcriptional regulator, at 297,627 to 297,830
_RS01520
MMJJ_RS01525: MMJJ_RS01525 - ketopantoate reductase family protein, at 297,845 to 298,765
_RS01525
Position (kb) 297
298 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 296.653 kb on - strand, within MMJJ_RS01510 at 296.712 kb on + strand, within MMJJ_RS01510 at 296.744 kb on - strand, within MMJJ_RS01510 at 296.874 kb on - strand, within MMJJ_RS01510 at 296.916 kb on - strand, within MMJJ_RS01510 at 297.015 kb on + strand at 297.066 kb on - strand at 297.069 kb on + strand at 297.073 kb on - strand at 297.074 kb on + strand at 297.076 kb on + strand at 297.088 kb on - strand at 297.107 kb on + strand at 297.115 kb on - strand at 297.120 kb on - strand at 297.121 kb on + strand at 297.126 kb on + strand at 297.126 kb on + strand at 297.126 kb on + strand at 297.129 kb on + strand at 297.195 kb on + strand at 297.208 kb on - strand at 297.254 kb on - strand at 297.259 kb on - strand at 297.273 kb on - strand, within MMJJ_RS01515 at 297.274 kb on + strand, within MMJJ_RS01515 at 297.321 kb on + strand, within MMJJ_RS01515 at 297.343 kb on + strand, within MMJJ_RS01515 at 297.370 kb on - strand, within MMJJ_RS01515 at 297.371 kb on + strand, within MMJJ_RS01515 at 297.394 kb on + strand, within MMJJ_RS01515 at 297.394 kb on + strand, within MMJJ_RS01515 at 297.504 kb on + strand, within MMJJ_RS01515 at 297.504 kb on + strand, within MMJJ_RS01515 at 297.552 kb on - strand, within MMJJ_RS01515 at 297.567 kb on - strand, within MMJJ_RS01515 at 297.567 kb on - strand, within MMJJ_RS01515 at 297.588 kb on - strand at 297.588 kb on - strand at 297.588 kb on - strand at 297.588 kb on - strand at 297.588 kb on - strand at 297.589 kb on + strand at 297.589 kb on + strand at 297.589 kb on + strand at 297.589 kb on + strand at 297.589 kb on + strand at 297.589 kb on + strand at 297.589 kb on + strand at 297.641 kb on - strand at 297.651 kb on + strand, within MMJJ_RS01520 at 297.717 kb on + strand, within MMJJ_RS01520 at 297.757 kb on - strand, within MMJJ_RS01520 at 297.757 kb on - strand, within MMJJ_RS01520 at 297.779 kb on + strand, within MMJJ_RS01520 at 297.802 kb on - strand, within MMJJ_RS01520 at 297.802 kb on - strand, within MMJJ_RS01520 at 297.807 kb on + strand, within MMJJ_RS01520 at 297.842 kb on - strand at 297.864 kb on + strand at 297.901 kb on - strand at 297.906 kb on - strand at 297.965 kb on - strand, within MMJJ_RS01525 at 297.965 kb on - strand, within MMJJ_RS01525 at 297.976 kb on - strand, within MMJJ_RS01525 at 297.976 kb on - strand, within MMJJ_RS01525 at 297.977 kb on + strand, within MMJJ_RS01525 at 298.059 kb on - strand, within MMJJ_RS01525 at 298.124 kb on - strand, within MMJJ_RS01525 at 298.129 kb on - strand, within MMJJ_RS01525 at 298.130 kb on + strand, within MMJJ_RS01525 at 298.130 kb on + strand, within MMJJ_RS01525 at 298.135 kb on - strand, within MMJJ_RS01525 at 298.141 kb on - strand, within MMJJ_RS01525 at 298.142 kb on + strand, within MMJJ_RS01525 at 298.142 kb on + strand, within MMJJ_RS01525 at 298.186 kb on - strand, within MMJJ_RS01525 at 298.217 kb on + strand, within MMJJ_RS01525 at 298.218 kb on - strand, within MMJJ_RS01525 at 298.250 kb on + strand, within MMJJ_RS01525 at 298.361 kb on - strand, within MMJJ_RS01525 at 298.362 kb on + strand, within MMJJ_RS01525 at 298.408 kb on - strand, within MMJJ_RS01525 at 298.412 kb on + strand, within MMJJ_RS01525 at 298.412 kb on + strand, within MMJJ_RS01525 at 298.412 kb on + strand, within MMJJ_RS01525 at 298.430 kb on + strand, within MMJJ_RS01525 at 298.435 kb on - strand, within MMJJ_RS01525 at 298.435 kb on - strand, within MMJJ_RS01525 at 298.436 kb on + strand, within MMJJ_RS01525 at 298.436 kb on + strand, within MMJJ_RS01525 at 298.437 kb on - strand, within MMJJ_RS01525 at 298.443 kb on + strand, within MMJJ_RS01525 at 298.500 kb on + strand, within MMJJ_RS01525 at 298.500 kb on + strand, within MMJJ_RS01525 at 298.501 kb on - strand at 298.501 kb on - strand, within MMJJ_RS01525 at 298.553 kb on - strand, within MMJJ_RS01525 at 298.554 kb on + strand, within MMJJ_RS01525 at 298.555 kb on - strand, within MMJJ_RS01525 at 298.555 kb on - strand, within MMJJ_RS01525 at 298.556 kb on + strand, within MMJJ_RS01525 at 298.558 kb on - strand, within MMJJ_RS01525 at 298.558 kb on - strand, within MMJJ_RS01525 at 298.559 kb on + strand, within MMJJ_RS01525 at 298.561 kb on - strand, within MMJJ_RS01525 at 298.563 kb on - strand, within MMJJ_RS01525 at 298.563 kb on - strand, within MMJJ_RS01525 at 298.656 kb on + strand, within MMJJ_RS01525 at 298.700 kb on - strand at 298.721 kb on - strand at 298.727 kb on - strand at 298.754 kb on - strand at 298.820 kb on - strand at 298.820 kb on - strand at 298.821 kb on + strand at 298.823 kb on - strand at 298.826 kb on - strand at 298.827 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 2mM Adenosine remove 296,653 - MMJJ_RS01510 0.68 +1.0 296,712 + MMJJ_RS01510 0.72 -0.6 296,744 - MMJJ_RS01510 0.75 +1.3 296,874 - MMJJ_RS01510 0.84 -1.6 296,916 - MMJJ_RS01510 0.87 -2.8 297,015 + -1.4 297,066 - +0.2 297,069 + -0.6 297,073 - +1.7 297,074 + +0.1 297,076 + -1.3 297,088 - +0.4 297,107 + -0.3 297,115 - +2.0 297,120 - -2.0 297,121 + -1.4 297,126 + -1.6 297,126 + -0.6 297,126 + +1.9 297,129 + +0.4 297,195 + +0.4 297,208 - +1.2 297,254 - -1.4 297,259 - +1.4 297,273 - MMJJ_RS01515 0.11 -0.6 297,274 + MMJJ_RS01515 0.11 -0.2 297,321 + MMJJ_RS01515 0.24 +2.5 297,343 + MMJJ_RS01515 0.29 -1.9 297,370 - MMJJ_RS01515 0.36 +1.3 297,371 + MMJJ_RS01515 0.36 -1.8 297,394 + MMJJ_RS01515 0.42 -1.1 297,394 + MMJJ_RS01515 0.42 +1.6 297,504 + MMJJ_RS01515 0.71 -1.8 297,504 + MMJJ_RS01515 0.71 +1.5 297,552 - MMJJ_RS01515 0.83 +2.3 297,567 - MMJJ_RS01515 0.87 +1.3 297,567 - MMJJ_RS01515 0.87 -0.4 297,588 - -3.1 297,588 - -0.4 297,588 - -1.7 297,588 - -0.8 297,588 - +2.2 297,589 + +0.2 297,589 + -0.9 297,589 + -0.5 297,589 + -1.2 297,589 + -1.1 297,589 + +0.0 297,589 + +1.3 297,641 - +1.6 297,651 + MMJJ_RS01520 0.12 +0.0 297,717 + MMJJ_RS01520 0.44 -1.1 297,757 - MMJJ_RS01520 0.64 +1.4 297,757 - MMJJ_RS01520 0.64 +2.8 297,779 + MMJJ_RS01520 0.75 +0.8 297,802 - MMJJ_RS01520 0.86 +0.8 297,802 - MMJJ_RS01520 0.86 +0.2 297,807 + MMJJ_RS01520 0.88 +1.3 297,842 - -0.1 297,864 + +1.8 297,901 - -0.3 297,906 - -2.2 297,965 - MMJJ_RS01525 0.13 +0.3 297,965 - MMJJ_RS01525 0.13 -1.1 297,976 - MMJJ_RS01525 0.14 -0.0 297,976 - MMJJ_RS01525 0.14 -0.3 297,977 + MMJJ_RS01525 0.14 +1.8 298,059 - MMJJ_RS01525 0.23 -0.0 298,124 - MMJJ_RS01525 0.30 -0.4 298,129 - MMJJ_RS01525 0.31 -0.7 298,130 + MMJJ_RS01525 0.31 -0.5 298,130 + MMJJ_RS01525 0.31 -0.5 298,135 - MMJJ_RS01525 0.31 -0.5 298,141 - MMJJ_RS01525 0.32 -0.0 298,142 + MMJJ_RS01525 0.32 +1.0 298,142 + MMJJ_RS01525 0.32 -0.7 298,186 - MMJJ_RS01525 0.37 -0.3 298,217 + MMJJ_RS01525 0.40 -1.1 298,218 - MMJJ_RS01525 0.40 -2.4 298,250 + MMJJ_RS01525 0.44 +1.1 298,361 - MMJJ_RS01525 0.56 -0.8 298,362 + MMJJ_RS01525 0.56 +0.7 298,408 - MMJJ_RS01525 0.61 -2.0 298,412 + MMJJ_RS01525 0.62 -0.6 298,412 + MMJJ_RS01525 0.62 +0.7 298,412 + MMJJ_RS01525 0.62 +1.0 298,430 + MMJJ_RS01525 0.64 -1.6 298,435 - MMJJ_RS01525 0.64 -1.5 298,435 - MMJJ_RS01525 0.64 +0.1 298,436 + MMJJ_RS01525 0.64 +0.3 298,436 + MMJJ_RS01525 0.64 -0.6 298,437 - MMJJ_RS01525 0.64 +2.8 298,443 + MMJJ_RS01525 0.65 +0.6 298,500 + MMJJ_RS01525 0.71 +0.2 298,500 + MMJJ_RS01525 0.71 +0.3 298,501 - +1.3 298,501 - MMJJ_RS01525 0.71 -0.5 298,553 - MMJJ_RS01525 0.77 +0.7 298,554 + MMJJ_RS01525 0.77 -2.3 298,555 - MMJJ_RS01525 0.77 +0.2 298,555 - MMJJ_RS01525 0.77 -0.6 298,556 + MMJJ_RS01525 0.77 +0.2 298,558 - MMJJ_RS01525 0.77 -1.2 298,558 - MMJJ_RS01525 0.77 -1.0 298,559 + MMJJ_RS01525 0.78 -1.8 298,561 - MMJJ_RS01525 0.78 +0.2 298,563 - MMJJ_RS01525 0.78 -0.1 298,563 - MMJJ_RS01525 0.78 +0.4 298,656 + MMJJ_RS01525 0.88 +2.9 298,700 - +0.8 298,721 - +0.2 298,727 - -0.3 298,754 - -2.2 298,820 - -2.1 298,820 - -0.5 298,821 + -1.2 298,823 - -0.1 298,826 - -0.8 298,827 + +1.4
Or see this region's nucleotide sequence