Experiment: H2 N-free with 2mM Adenosine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS01040 and MMJJ_RS09250 are separated by 4 nucleotides MMJJ_RS09250 and MMJJ_RS01045 are separated by 122 nucleotides MMJJ_RS01045 and MMJJ_RS01050 are separated by 12 nucleotides
MMJJ_RS01040: MMJJ_RS01040 - DUF4013 domain-containing protein, at 202,790 to 203,407
_RS01040
MMJJ_RS09250: MMJJ_RS09250 - hypothetical protein, at 203,412 to 203,669
_RS09250
MMJJ_RS01045: MMJJ_RS01045 - ABC transporter permease, at 203,792 to 205,015
_RS01045
MMJJ_RS01050: MMJJ_RS01050 - COG1361 S-layer family protein, at 205,028 to 206,287
_RS01050
Position (kb) 203
204
205
206 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 202.803 kb on + strand at 202.831 kb on + strand at 202.831 kb on + strand at 202.833 kb on - strand at 202.833 kb on - strand at 202.833 kb on - strand at 202.833 kb on - strand at 202.833 kb on - strand at 202.834 kb on + strand at 202.835 kb on - strand at 202.835 kb on - strand at 202.836 kb on + strand at 202.877 kb on - strand, within MMJJ_RS01040 at 202.890 kb on + strand, within MMJJ_RS01040 at 202.893 kb on - strand, within MMJJ_RS01040 at 203.015 kb on + strand, within MMJJ_RS01040 at 203.020 kb on + strand, within MMJJ_RS01040 at 203.021 kb on - strand, within MMJJ_RS01040 at 203.074 kb on + strand, within MMJJ_RS01040 at 203.153 kb on + strand, within MMJJ_RS01040 at 203.153 kb on + strand, within MMJJ_RS01040 at 203.154 kb on - strand, within MMJJ_RS01040 at 203.155 kb on + strand, within MMJJ_RS01040 at 203.155 kb on + strand, within MMJJ_RS01040 at 203.179 kb on - strand, within MMJJ_RS01040 at 203.220 kb on + strand, within MMJJ_RS01040 at 203.237 kb on - strand, within MMJJ_RS01040 at 203.240 kb on - strand, within MMJJ_RS01040 at 203.313 kb on + strand, within MMJJ_RS01040 at 203.322 kb on + strand, within MMJJ_RS01040 at 203.362 kb on - strand at 203.363 kb on + strand at 203.364 kb on - strand at 203.453 kb on + strand, within MMJJ_RS09250 at 203.453 kb on + strand, within MMJJ_RS09250 at 203.474 kb on - strand, within MMJJ_RS09250 at 203.480 kb on - strand, within MMJJ_RS09250 at 203.485 kb on - strand, within MMJJ_RS09250 at 203.564 kb on + strand, within MMJJ_RS09250 at 203.608 kb on - strand, within MMJJ_RS09250 at 203.667 kb on - strand at 203.668 kb on + strand at 203.766 kb on + strand at 203.781 kb on + strand at 203.784 kb on + strand at 203.789 kb on - strand at 203.803 kb on - strand at 203.838 kb on - strand at 203.838 kb on - strand at 203.858 kb on - strand at 203.873 kb on - strand at 203.874 kb on + strand at 203.916 kb on - strand, within MMJJ_RS01045 at 203.948 kb on - strand, within MMJJ_RS01045 at 203.949 kb on + strand, within MMJJ_RS01045 at 203.951 kb on - strand, within MMJJ_RS01045 at 203.951 kb on - strand, within MMJJ_RS01045 at 203.951 kb on - strand, within MMJJ_RS01045 at 203.952 kb on + strand, within MMJJ_RS01045 at 203.952 kb on + strand, within MMJJ_RS01045 at 203.952 kb on + strand, within MMJJ_RS01045 at 203.952 kb on + strand, within MMJJ_RS01045 at 203.952 kb on + strand, within MMJJ_RS01045 at 203.952 kb on + strand, within MMJJ_RS01045 at 203.955 kb on - strand, within MMJJ_RS01045 at 203.955 kb on - strand, within MMJJ_RS01045 at 203.955 kb on - strand, within MMJJ_RS01045 at 203.955 kb on - strand, within MMJJ_RS01045 at 203.956 kb on + strand, within MMJJ_RS01045 at 203.956 kb on + strand, within MMJJ_RS01045 at 203.956 kb on + strand, within MMJJ_RS01045 at 203.956 kb on + strand, within MMJJ_RS01045 at 203.956 kb on + strand, within MMJJ_RS01045 at 203.956 kb on + strand, within MMJJ_RS01045 at 203.956 kb on + strand, within MMJJ_RS01045 at 203.956 kb on + strand, within MMJJ_RS01045 at 203.960 kb on + strand, within MMJJ_RS01045 at 203.960 kb on + strand, within MMJJ_RS01045 at 203.960 kb on + strand, within MMJJ_RS01045 at 203.960 kb on + strand, within MMJJ_RS01045 at 203.975 kb on - strand, within MMJJ_RS01045 at 204.019 kb on - strand, within MMJJ_RS01045 at 204.153 kb on + strand, within MMJJ_RS01045 at 204.205 kb on - strand, within MMJJ_RS01045 at 204.326 kb on - strand, within MMJJ_RS01045 at 204.327 kb on + strand, within MMJJ_RS01045 at 204.327 kb on + strand, within MMJJ_RS01045 at 204.361 kb on + strand, within MMJJ_RS01045 at 204.482 kb on - strand, within MMJJ_RS01045 at 204.483 kb on + strand, within MMJJ_RS01045 at 204.505 kb on - strand, within MMJJ_RS01045 at 204.537 kb on + strand, within MMJJ_RS01045 at 204.722 kb on - strand, within MMJJ_RS01045 at 204.739 kb on + strand, within MMJJ_RS01045 at 204.739 kb on + strand, within MMJJ_RS01045 at 204.743 kb on + strand, within MMJJ_RS01045 at 204.753 kb on + strand, within MMJJ_RS01045 at 204.770 kb on - strand, within MMJJ_RS01045 at 204.770 kb on - strand, within MMJJ_RS01045 at 204.771 kb on + strand, within MMJJ_RS01045 at 204.771 kb on + strand, within MMJJ_RS01045 at 204.771 kb on + strand, within MMJJ_RS01045 at 204.771 kb on + strand, within MMJJ_RS01045 at 204.826 kb on + strand, within MMJJ_RS01045 at 204.827 kb on - strand, within MMJJ_RS01045 at 204.828 kb on + strand, within MMJJ_RS01045 at 204.836 kb on - strand, within MMJJ_RS01045 at 204.907 kb on - strand at 204.908 kb on + strand at 204.908 kb on + strand at 204.944 kb on + strand at 204.960 kb on + strand at 205.073 kb on - strand at 205.074 kb on + strand at 205.104 kb on + strand at 205.124 kb on - strand at 205.170 kb on - strand, within MMJJ_RS01050 at 205.170 kb on - strand, within MMJJ_RS01050 at 205.171 kb on + strand, within MMJJ_RS01050 at 205.171 kb on + strand, within MMJJ_RS01050 at 205.174 kb on - strand, within MMJJ_RS01050 at 205.175 kb on + strand, within MMJJ_RS01050 at 205.218 kb on + strand, within MMJJ_RS01050 at 205.245 kb on - strand, within MMJJ_RS01050 at 205.245 kb on - strand, within MMJJ_RS01050 at 205.245 kb on - strand, within MMJJ_RS01050 at 205.246 kb on + strand, within MMJJ_RS01050 at 205.246 kb on + strand, within MMJJ_RS01050 at 205.248 kb on - strand, within MMJJ_RS01050 at 205.248 kb on - strand, within MMJJ_RS01050 at 205.249 kb on + strand, within MMJJ_RS01050 at 205.249 kb on + strand, within MMJJ_RS01050 at 205.314 kb on - strand, within MMJJ_RS01050 at 205.314 kb on - strand, within MMJJ_RS01050 at 205.314 kb on - strand, within MMJJ_RS01050 at 205.314 kb on - strand, within MMJJ_RS01050 at 205.314 kb on - strand, within MMJJ_RS01050 at 205.315 kb on + strand, within MMJJ_RS01050 at 205.315 kb on + strand, within MMJJ_RS01050 at 205.315 kb on + strand, within MMJJ_RS01050 at 205.320 kb on - strand, within MMJJ_RS01050 at 205.320 kb on - strand, within MMJJ_RS01050 at 205.347 kb on + strand, within MMJJ_RS01050 at 205.347 kb on + strand, within MMJJ_RS01050 at 205.367 kb on - strand, within MMJJ_RS01050 at 205.393 kb on - strand, within MMJJ_RS01050 at 205.395 kb on - strand, within MMJJ_RS01050 at 205.395 kb on - strand, within MMJJ_RS01050 at 205.448 kb on + strand, within MMJJ_RS01050 at 205.449 kb on - strand, within MMJJ_RS01050 at 205.510 kb on - strand, within MMJJ_RS01050 at 205.510 kb on - strand, within MMJJ_RS01050 at 205.565 kb on - strand, within MMJJ_RS01050 at 205.566 kb on + strand, within MMJJ_RS01050 at 205.569 kb on - strand, within MMJJ_RS01050 at 205.570 kb on + strand, within MMJJ_RS01050 at 205.574 kb on + strand, within MMJJ_RS01050 at 205.574 kb on + strand, within MMJJ_RS01050 at 205.574 kb on + strand, within MMJJ_RS01050 at 205.577 kb on - strand, within MMJJ_RS01050 at 205.578 kb on + strand, within MMJJ_RS01050 at 205.584 kb on - strand, within MMJJ_RS01050 at 205.585 kb on + strand, within MMJJ_RS01050 at 205.599 kb on + strand, within MMJJ_RS01050 at 205.599 kb on + strand, within MMJJ_RS01050 at 205.656 kb on - strand, within MMJJ_RS01050 at 205.657 kb on + strand, within MMJJ_RS01050 at 205.657 kb on + strand, within MMJJ_RS01050 at 205.673 kb on + strand, within MMJJ_RS01050 at 205.737 kb on + strand, within MMJJ_RS01050 at 205.797 kb on + strand, within MMJJ_RS01050 at 205.847 kb on - strand, within MMJJ_RS01050 at 205.867 kb on + strand, within MMJJ_RS01050 at 205.904 kb on - strand, within MMJJ_RS01050 at 205.943 kb on - strand, within MMJJ_RS01050 at 205.954 kb on - strand, within MMJJ_RS01050 at 205.955 kb on + strand, within MMJJ_RS01050 at 205.966 kb on - strand, within MMJJ_RS01050 at 205.971 kb on + strand, within MMJJ_RS01050 at 206.001 kb on + strand, within MMJJ_RS01050
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 2mM Adenosine remove 202,803 + -1.6 202,831 + +1.4 202,831 + -1.2 202,833 - -1.3 202,833 - +0.0 202,833 - +0.8 202,833 - -1.1 202,833 - +0.3 202,834 + -1.7 202,835 - -0.9 202,835 - -3.2 202,836 + +0.6 202,877 - MMJJ_RS01040 0.14 -1.1 202,890 + MMJJ_RS01040 0.16 +0.2 202,893 - MMJJ_RS01040 0.17 -0.5 203,015 + MMJJ_RS01040 0.36 +3.4 203,020 + MMJJ_RS01040 0.37 -0.1 203,021 - MMJJ_RS01040 0.37 -1.8 203,074 + MMJJ_RS01040 0.46 +0.4 203,153 + MMJJ_RS01040 0.59 +1.8 203,153 + MMJJ_RS01040 0.59 -2.9 203,154 - MMJJ_RS01040 0.59 +0.6 203,155 + MMJJ_RS01040 0.59 -1.2 203,155 + MMJJ_RS01040 0.59 -1.2 203,179 - MMJJ_RS01040 0.63 +4.0 203,220 + MMJJ_RS01040 0.70 +0.9 203,237 - MMJJ_RS01040 0.72 +0.8 203,240 - MMJJ_RS01040 0.73 +1.2 203,313 + MMJJ_RS01040 0.85 +1.1 203,322 + MMJJ_RS01040 0.86 +1.7 203,362 - +1.3 203,363 + -1.4 203,364 - +0.7 203,453 + MMJJ_RS09250 0.16 +1.5 203,453 + MMJJ_RS09250 0.16 +0.8 203,474 - MMJJ_RS09250 0.24 -0.4 203,480 - MMJJ_RS09250 0.26 +0.9 203,485 - MMJJ_RS09250 0.28 +0.1 203,564 + MMJJ_RS09250 0.59 +1.0 203,608 - MMJJ_RS09250 0.76 +1.1 203,667 - +2.1 203,668 + +1.5 203,766 + +0.4 203,781 + -0.3 203,784 + +0.3 203,789 - +1.4 203,803 - -1.6 203,838 - -0.1 203,838 - -0.7 203,858 - -0.6 203,873 - -2.4 203,874 + -1.9 203,916 - MMJJ_RS01045 0.10 +0.6 203,948 - MMJJ_RS01045 0.13 -2.7 203,949 + MMJJ_RS01045 0.13 -2.0 203,951 - MMJJ_RS01045 0.13 -1.1 203,951 - MMJJ_RS01045 0.13 -1.4 203,951 - MMJJ_RS01045 0.13 -1.9 203,952 + MMJJ_RS01045 0.13 -0.9 203,952 + MMJJ_RS01045 0.13 +0.2 203,952 + MMJJ_RS01045 0.13 +0.3 203,952 + MMJJ_RS01045 0.13 +0.2 203,952 + MMJJ_RS01045 0.13 +0.7 203,952 + MMJJ_RS01045 0.13 +0.6 203,955 - MMJJ_RS01045 0.13 +2.4 203,955 - MMJJ_RS01045 0.13 -0.4 203,955 - MMJJ_RS01045 0.13 +0.5 203,955 - MMJJ_RS01045 0.13 -1.2 203,956 + MMJJ_RS01045 0.13 -1.2 203,956 + MMJJ_RS01045 0.13 +0.9 203,956 + MMJJ_RS01045 0.13 +0.5 203,956 + MMJJ_RS01045 0.13 +0.0 203,956 + MMJJ_RS01045 0.13 +0.5 203,956 + MMJJ_RS01045 0.13 +1.8 203,956 + MMJJ_RS01045 0.13 +0.9 203,956 + MMJJ_RS01045 0.13 +0.2 203,960 + MMJJ_RS01045 0.14 -1.7 203,960 + MMJJ_RS01045 0.14 -1.7 203,960 + MMJJ_RS01045 0.14 -0.4 203,960 + MMJJ_RS01045 0.14 +0.5 203,975 - MMJJ_RS01045 0.15 -1.2 204,019 - MMJJ_RS01045 0.19 +0.8 204,153 + MMJJ_RS01045 0.29 -0.6 204,205 - MMJJ_RS01045 0.34 -0.7 204,326 - MMJJ_RS01045 0.44 -0.9 204,327 + MMJJ_RS01045 0.44 -1.9 204,327 + MMJJ_RS01045 0.44 -1.4 204,361 + MMJJ_RS01045 0.46 -1.2 204,482 - MMJJ_RS01045 0.56 +1.4 204,483 + MMJJ_RS01045 0.56 -0.3 204,505 - MMJJ_RS01045 0.58 -1.6 204,537 + MMJJ_RS01045 0.61 -1.8 204,722 - MMJJ_RS01045 0.76 -1.8 204,739 + MMJJ_RS01045 0.77 -2.0 204,739 + MMJJ_RS01045 0.77 -0.1 204,743 + MMJJ_RS01045 0.78 +0.3 204,753 + MMJJ_RS01045 0.79 -0.1 204,770 - MMJJ_RS01045 0.80 -1.5 204,770 - MMJJ_RS01045 0.80 -0.4 204,771 + MMJJ_RS01045 0.80 +1.3 204,771 + MMJJ_RS01045 0.80 -2.7 204,771 + MMJJ_RS01045 0.80 -0.5 204,771 + MMJJ_RS01045 0.80 +0.6 204,826 + MMJJ_RS01045 0.84 +2.9 204,827 - MMJJ_RS01045 0.85 -0.5 204,828 + MMJJ_RS01045 0.85 -0.6 204,836 - MMJJ_RS01045 0.85 -1.0 204,907 - +1.1 204,908 + -1.6 204,908 + +1.0 204,944 + -0.4 204,960 + -0.8 205,073 - -0.8 205,074 + -0.7 205,104 + +2.4 205,124 - -1.8 205,170 - MMJJ_RS01050 0.11 -1.7 205,170 - MMJJ_RS01050 0.11 -0.3 205,171 + MMJJ_RS01050 0.11 +0.6 205,171 + MMJJ_RS01050 0.11 +1.8 205,174 - MMJJ_RS01050 0.12 +1.6 205,175 + MMJJ_RS01050 0.12 -1.6 205,218 + MMJJ_RS01050 0.15 -2.0 205,245 - MMJJ_RS01050 0.17 +0.2 205,245 - MMJJ_RS01050 0.17 -1.4 205,245 - MMJJ_RS01050 0.17 +0.0 205,246 + MMJJ_RS01050 0.17 -0.4 205,246 + MMJJ_RS01050 0.17 +1.8 205,248 - MMJJ_RS01050 0.17 +2.3 205,248 - MMJJ_RS01050 0.17 -1.0 205,249 + MMJJ_RS01050 0.18 +1.0 205,249 + MMJJ_RS01050 0.18 +1.1 205,314 - MMJJ_RS01050 0.23 +0.9 205,314 - MMJJ_RS01050 0.23 -1.7 205,314 - MMJJ_RS01050 0.23 -1.7 205,314 - MMJJ_RS01050 0.23 +0.6 205,314 - MMJJ_RS01050 0.23 -0.1 205,315 + MMJJ_RS01050 0.23 -2.7 205,315 + MMJJ_RS01050 0.23 +1.2 205,315 + MMJJ_RS01050 0.23 +2.1 205,320 - MMJJ_RS01050 0.23 +1.7 205,320 - MMJJ_RS01050 0.23 -0.6 205,347 + MMJJ_RS01050 0.25 -0.3 205,347 + MMJJ_RS01050 0.25 +0.2 205,367 - MMJJ_RS01050 0.27 -1.6 205,393 - MMJJ_RS01050 0.29 +2.2 205,395 - MMJJ_RS01050 0.29 -0.5 205,395 - MMJJ_RS01050 0.29 -0.2 205,448 + MMJJ_RS01050 0.33 +2.5 205,449 - MMJJ_RS01050 0.33 -0.1 205,510 - MMJJ_RS01050 0.38 -0.4 205,510 - MMJJ_RS01050 0.38 -1.3 205,565 - MMJJ_RS01050 0.43 -0.7 205,566 + MMJJ_RS01050 0.43 -0.8 205,569 - MMJJ_RS01050 0.43 -1.8 205,570 + MMJJ_RS01050 0.43 -1.0 205,574 + MMJJ_RS01050 0.43 -1.1 205,574 + MMJJ_RS01050 0.43 +6.3 205,574 + MMJJ_RS01050 0.43 +0.4 205,577 - MMJJ_RS01050 0.44 -0.0 205,578 + MMJJ_RS01050 0.44 -2.8 205,584 - MMJJ_RS01050 0.44 +0.9 205,585 + MMJJ_RS01050 0.44 -0.3 205,599 + MMJJ_RS01050 0.45 -0.0 205,599 + MMJJ_RS01050 0.45 -0.0 205,656 - MMJJ_RS01050 0.50 -0.5 205,657 + MMJJ_RS01050 0.50 +0.8 205,657 + MMJJ_RS01050 0.50 +0.2 205,673 + MMJJ_RS01050 0.51 -0.2 205,737 + MMJJ_RS01050 0.56 -0.2 205,797 + MMJJ_RS01050 0.61 -1.3 205,847 - MMJJ_RS01050 0.65 -0.7 205,867 + MMJJ_RS01050 0.67 +0.5 205,904 - MMJJ_RS01050 0.70 -2.2 205,943 - MMJJ_RS01050 0.73 +0.3 205,954 - MMJJ_RS01050 0.73 -1.7 205,955 + MMJJ_RS01050 0.74 -1.1 205,966 - MMJJ_RS01050 0.74 -1.3 205,971 + MMJJ_RS01050 0.75 +0.3 206,001 + MMJJ_RS01050 0.77 -1.9
Or see this region's nucleotide sequence