Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1256

Experiment: Chlorite 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 0.5 mM
1,320,950	+				+0.6
1,320,951	-				+0.0
1,321,187	+				+0.1
1,321,188	-		Ga0059261_1255	0.20	+1.6
1,321,188	-		Ga0059261_1255	0.20	+0.1
1,321,188	-		Ga0059261_1255	0.20	+0.4
1,321,319	+		Ga0059261_1255	0.36	+0.3
1,321,319	+		Ga0059261_1255	0.36	-0.7
1,321,319	+		Ga0059261_1255	0.36	-0.5
1,321,319	+		Ga0059261_1255	0.36	-0.2
1,321,320	-		Ga0059261_1255	0.36	-0.2
1,321,320	-		Ga0059261_1255	0.36	+0.3
1,321,320	-		Ga0059261_1255	0.36	-0.6
1,321,331	+		Ga0059261_1255	0.37	+0.0
1,321,358	+		Ga0059261_1255	0.40	-0.6
1,321,358	+		Ga0059261_1255	0.40	-0.0
1,321,358	+		Ga0059261_1255	0.40	+0.4
1,321,358	+		Ga0059261_1255	0.40	+0.5
1,321,358	+		Ga0059261_1255	0.40	+0.2
1,321,358	+		Ga0059261_1255	0.40	-0.6
1,321,358	+		Ga0059261_1255	0.40	-0.2
1,321,359	-		Ga0059261_1255	0.40	+0.3
1,321,359	-		Ga0059261_1255	0.40	+0.5
1,321,359	-		Ga0059261_1255	0.40	+1.6
1,321,359	-		Ga0059261_1255	0.40	+0.5
1,321,359	-		Ga0059261_1255	0.40	-3.0
1,321,359	-		Ga0059261_1255	0.40	+0.3
1,321,742	+		Ga0059261_1255	0.86	-0.3
1,321,742	+		Ga0059261_1255	0.86	-0.7
1,321,742	+		Ga0059261_1255	0.86	+0.6
1,321,743	-		Ga0059261_1255	0.86	-1.1
1,321,743	-		Ga0059261_1255	0.86	-0.3
1,321,743	-		Ga0059261_1255	0.86	+0.6
1,321,743	-		Ga0059261_1255	0.86	+0.1
1,321,743	-		Ga0059261_1255	0.86	-0.1
1,321,743	-		Ga0059261_1255	0.86	-0.3
1,321,743	-		Ga0059261_1255	0.86	-0.5
1,321,743	-		Ga0059261_1255	0.86	+0.1
1,321,743	-		Ga0059261_1255	0.86	-0.7
1,321,743	-		Ga0059261_1255	0.86	+0.6
1,321,743	-		Ga0059261_1255	0.86	-0.5
1,321,743	-		Ga0059261_1255	0.86	-0.8
1,321,823	+				-0.2
1,321,823	+				-0.1
1,321,823	+				+1.2
1,321,823	+				-0.5
1,321,823	+				-0.1
1,321,823	+				+0.6
1,321,824	-				-0.3
1,321,824	-				+0.7
1,321,824	-				-1.6
1,321,824	-				+1.1
1,321,824	-				+0.5
1,321,824	-				-0.4
1,321,824	-				-1.2
1,321,824	-				-0.2
1,321,824	-				+0.1
1,321,824	-				+0.3
1,321,824	-				-1.4
1,321,824	-				-0.5
1,321,921	+				+1.3
1,321,921	+				-0.7
1,321,921	+				+1.8
1,321,921	+				-0.3
1,321,921	+				-0.0
1,321,922	-				+0.2
1,321,922	-				+0.1
1,321,922	-				+0.8
1,322,392	+		Ga0059261_1256	0.49	-0.3
1,322,392	+		Ga0059261_1256	0.49	-0.2
1,322,392	+		Ga0059261_1256	0.49	-0.0
1,322,393	-		Ga0059261_1256	0.49	-0.2
1,322,393	-		Ga0059261_1256	0.49	+1.8
1,322,393	-		Ga0059261_1256	0.49	-0.1
1,322,626	+		Ga0059261_1256	0.75	+0.6
1,322,626	+		Ga0059261_1256	0.75	-0.4
1,322,626	+		Ga0059261_1256	0.75	+0.3
1,322,626	+		Ga0059261_1256	0.75	+0.6
1,322,626	+		Ga0059261_1256	0.75	-2.1
1,322,626	+		Ga0059261_1256	0.75	+0.3
1,322,627	-		Ga0059261_1256	0.75	-0.7
1,322,627	-		Ga0059261_1256	0.75	-0.2
1,322,627	-		Ga0059261_1256	0.75	+1.0
1,322,627	-		Ga0059261_1256	0.75	+0.1
1,322,627	-		Ga0059261_1256	0.75	-1.1
1,322,627	-		Ga0059261_1256	0.75	-0.3
1,322,627	-		Ga0059261_1256	0.75	+1.2
1,322,634	+		Ga0059261_1256	0.76	+1.1
1,322,634	+		Ga0059261_1256	0.76	+0.5
1,322,634	+		Ga0059261_1256	0.76	-0.1
1,322,635	-		Ga0059261_1256	0.76	-0.4
1,322,635	-		Ga0059261_1256	0.76	+0.1
1,322,796	+				-0.5
1,322,796	+				-0.0
1,322,796	+				-0.2
1,322,796	+				+0.1
1,322,796	+				-1.9
1,322,796	+				-0.5
1,322,796	+				+0.9
1,322,796	+				+1.1
1,322,796	+				+0.3
1,322,796	+				+0.7
1,322,796	+				+1.3
1,322,797	-				-0.1
1,322,797	-				+0.5
1,322,797	-				+1.1
1,322,797	-				-0.0
1,322,797	-				-0.1
1,322,797	-				+0.2
1,322,797	-				+0.4
1,322,797	-				+0.9
1,322,797	-				+0.1
1,322,797	-				+1.1
1,322,797	-				-0.2
1,322,797	-				+0.1
1,322,837	+				+0.9
1,322,838	-				+0.2
1,322,854	+				-0.2
1,322,854	+				+0.2
1,322,855	-				+0.1
1,322,892	+				-1.2
1,322,892	+				-1.9
1,322,892	+				-2.1
1,322,892	+				-2.1
1,322,892	+				+0.1
1,322,892	+				-2.3
1,322,893	-				-1.7
1,322,893	-				-2.1
1,323,084	+		Ga0059261_1257	0.33	-0.4
1,323,084	+		Ga0059261_1257	0.33	-0.6
1,323,084	+		Ga0059261_1257	0.33	-1.6
1,323,085	-		Ga0059261_1257	0.33	-2.4
1,323,085	-		Ga0059261_1257	0.33	-2.1
1,323,085	-		Ga0059261_1257	0.33	-2.8
1,323,085	-				-1.2
1,323,129	+		Ga0059261_1257	0.40	-3.0
1,323,129	+		Ga0059261_1257	0.40	+0.1
1,323,130	-		Ga0059261_1257	0.40	-2.5
1,323,130	-		Ga0059261_1257	0.40	-2.4
1,323,130	-		Ga0059261_1257	0.40	-2.4
1,323,130	-		Ga0059261_1257	0.40	-1.6
1,323,162	+		Ga0059261_1257	0.44	-1.7
1,323,162	+		Ga0059261_1257	0.44	-1.5
1,323,162	+		Ga0059261_1257	0.44	-1.3
1,323,282	+		Ga0059261_1257	0.62	-0.9
1,323,282	+		Ga0059261_1257	0.62	-1.8
1,323,283	-		Ga0059261_1257	0.62	-1.7
1,323,283	-		Ga0059261_1257	0.62	-2.5
1,323,283	-		Ga0059261_1257	0.62	-2.3
1,323,552	+				-1.4
1,323,553	-				-0.1
1,323,637	+				-2.0
1,323,638	-				-2.7
1,323,638	-				-3.6
1,323,638	-				-1.9
1,323,638	-				-2.4
1,323,701	+				-0.9
1,323,701	+				-0.2
1,323,701	+				-3.0
1,323,701	+				-3.5
1,323,702	-				-0.7
1,323,702	-				-3.5
1,323,702	-				+1.1
1,323,704	+				-1.7
1,323,704	+				-1.2
1,323,791	+				-2.6
1,323,791	+				-1.7
1,323,791	+				-1.9
1,323,791	+				-1.5
1,323,791	+				-1.5
1,323,792	-				-0.8
1,323,792	-				-1.9
1,323,792	-				-0.2
1,323,806	+				-2.4
1,323,806	+				-0.1
1,323,807	-				-1.5
1,323,807	-				-1.2
1,323,807	-				-2.2