Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02889

Experiment: PYE with nitrite 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 2.5 mM
3,036,457	-		CCNA_02888	0.26	-0.1
3,036,457	-		CCNA_02888	0.26	-0.5
3,036,485	+		CCNA_02888	0.28	+0.9
3,036,485	+		CCNA_02888	0.28	+0.9
3,036,485	+		CCNA_02888	0.28	-0.4
3,036,579	-		CCNA_02888	0.37	-0.1
3,036,594	+		CCNA_02888	0.38	-0.3
3,036,597	-		CCNA_02888	0.39	+0.9
3,036,597	-		CCNA_02888	0.39	+0.4
3,036,675	-		CCNA_02888	0.46	-1.2
3,036,675	-		CCNA_02888	0.46	-0.9
3,036,696	+		CCNA_02888	0.48	-0.1
3,036,697	-		CCNA_02888	0.48	+0.9
3,036,722	-		CCNA_02888	0.50	+0.9
3,036,722	-		CCNA_02888	0.50	-1.4
3,036,723	-		CCNA_02888	0.51	-0.9
3,036,726	-		CCNA_02888	0.51	-1.6
3,036,728	+		CCNA_02888	0.51	-0.1
3,036,733	+		CCNA_02888	0.51	+0.4
3,036,733	+		CCNA_02888	0.51	-2.5
3,036,736	-		CCNA_02888	0.52	-1.1
3,036,781	-		CCNA_02888	0.56	-0.6
3,036,792	+		CCNA_02888	0.57	-0.6
3,036,792	+		CCNA_02888	0.57	-1.9
3,036,800	-		CCNA_02888	0.58	+0.4
3,036,800	-		CCNA_02888	0.58	+1.4
3,036,805	-		CCNA_02888	0.58	+0.9
3,036,805	-		CCNA_02888	0.58	+0.9
3,036,892	-		CCNA_02888	0.66	-0.1
3,036,901	+		CCNA_02888	0.67	-1.2
3,036,901	+		CCNA_02888	0.67	-0.4
3,036,909	-		CCNA_02888	0.68	-0.6
3,036,909	-		CCNA_02888	0.68	+0.9
3,036,923	+		CCNA_02888	0.69	-0.9
3,036,980	+		CCNA_02888	0.75	-0.6
3,036,980	+		CCNA_02888	0.75	+0.1
3,036,988	-		CCNA_02888	0.75	+1.9
3,036,988	-		CCNA_02888	0.75	+0.4
3,036,993	-		CCNA_02888	0.76	+0.9
3,036,993	-		CCNA_02888	0.76	+0.1
3,036,993	-		CCNA_02888	0.76	+1.8
3,036,993	-		CCNA_02888	0.76	+0.2
3,037,017	-		CCNA_02888	0.78	-1.4
3,037,086	-		CCNA_02888	0.85	+0.4
3,037,100	+		CCNA_02888	0.86	-0.1
3,037,101	+		CCNA_02888	0.86	+2.9
3,037,115	+		CCNA_02888	0.87	-0.3
3,037,163	+				+1.9
3,037,163	+				-1.2
3,037,170	+				-1.2
3,037,170	+				+1.2
3,037,170	+				+0.2
3,037,191	+				+0.2
3,037,221	-				+0.6
3,037,225	+				+0.4
3,037,241	-				+0.4
3,037,276	-				+0.2
3,037,317	+				+0.5
3,037,317	+				-0.9
3,037,325	-				-0.3
3,037,363	-				-0.1
3,037,378	-				+0.8
3,037,379	-				+0.8
3,037,380	-				-2.7
3,037,380	-				+0.6
3,037,380	-				+0.8
3,037,390	+				-0.5
3,037,393	-				+2.3
3,037,398	+				-0.1
3,037,404	-				-0.6
3,037,430	-				+0.6
3,037,434	+				-0.2
3,037,501	+				-1.8
3,037,513	+		CCNA_02889	0.12	-0.2
3,037,532	-		CCNA_02889	0.16	+2.3
3,037,535	+				+1.0
3,037,535	+		CCNA_02889	0.16	+0.5
3,037,543	-		CCNA_02889	0.18	+0.4
3,037,548	-		CCNA_02889	0.19	+1.5
3,037,553	-		CCNA_02889	0.20	+0.2
3,037,555	+		CCNA_02889	0.20	+2.0
3,037,563	-		CCNA_02889	0.22	+1.8
3,037,563	-		CCNA_02889	0.22	+1.6
3,037,563	-		CCNA_02889	0.22	+1.5
3,037,599	+		CCNA_02889	0.29	+0.4
3,037,606	-		CCNA_02889	0.30	+1.3
3,037,643	+		CCNA_02889	0.37	+1.5
3,037,666	+		CCNA_02889	0.42	+1.5
3,037,674	-		CCNA_02889	0.44	+3.2
3,037,674	-		CCNA_02889	0.44	-0.7
3,037,725	+		CCNA_02889	0.54	-0.6
3,037,733	-		CCNA_02889	0.55	+1.7
3,037,744	-		CCNA_02889	0.57	+1.4
3,037,750	-		CCNA_02889	0.59	+2.3
3,037,751	-		CCNA_02889	0.59	+0.4
3,037,763	+		CCNA_02889	0.61	-0.0
3,037,763	+		CCNA_02889	0.61	-2.4
3,037,763	+		CCNA_02889	0.61	-2.3
3,037,763	+		CCNA_02889	0.61	-1.2
3,037,763	+		CCNA_02889	0.61	+0.2
3,037,763	+		CCNA_02889	0.61	+1.0
3,037,771	-		CCNA_02889	0.63	-1.5
3,037,771	-		CCNA_02889	0.63	+1.1
3,037,778	+		CCNA_02889	0.64	+0.5
3,037,807	-		CCNA_02889	0.70	+2.5
3,037,862	+		CCNA_02889	0.81	+0.4
3,037,870	-		CCNA_02889	0.82	-1.6
3,037,891	+		CCNA_02889	0.86	-0.4
3,037,892	+		CCNA_02889	0.87	+2.0
3,037,903	+		CCNA_02889	0.89	-0.8
3,037,905	-		CCNA_02889	0.89	-2.0
3,037,921	+				+3.0
3,037,936	+				+0.4
3,037,962	-				-0.0
3,037,973	+				+2.5
3,037,977	+				-2.1
3,038,041	-				+0.4
3,038,076	+				-0.0
3,038,088	+				-0.0
3,038,096	-				-1.0
3,038,097	-				+1.0
3,038,097	-				+0.2
3,038,097	-				+0.4
3,038,116	-				-0.3
3,038,139	-				-0.0
3,038,139	-				-1.2
3,038,148	-				-0.2
3,038,212	-				-0.8
3,038,215	+				+1.0
3,038,223	-				-1.3
3,038,241	+				-1.1
3,038,246	+				+0.0
3,038,254	-				+2.0
3,038,277	-		CCNA_02891	0.11	+1.0
3,038,351	+		CCNA_02891	0.15	-2.0
3,038,359	-		CCNA_02891	0.15	+0.9
3,038,385	-		CCNA_02891	0.17	-0.4
3,038,405	-		CCNA_02891	0.18	-1.4
3,038,405	-		CCNA_02891	0.18	-0.4
3,038,435	-		CCNA_02891	0.19	+0.6
3,038,503	-		CCNA_02891	0.23	-0.1
3,038,517	+		CCNA_02891	0.24	-0.5
3,038,549	+		CCNA_02891	0.25	-0.1
3,038,557	-		CCNA_02891	0.26	-1.5
3,038,557	-		CCNA_02891	0.26	-1.1
3,038,564	-		CCNA_02891	0.26	+1.4
3,038,571	-		CCNA_02891	0.27	-2.2
3,038,576	+		CCNA_02891	0.27	-1.2
3,038,577	+		CCNA_02891	0.27	-0.6
3,038,583	+		CCNA_02891	0.27	-0.6
3,038,583	+		CCNA_02891	0.27	-0.5
3,038,583	+		CCNA_02891	0.27	-1.6
3,038,583	+		CCNA_02891	0.27	+0.4
3,038,583	+		CCNA_02891	0.27	-0.9
3,038,583	+		CCNA_02891	0.27	-1.9
3,038,583	+		CCNA_02891	0.27	+0.1
3,038,589	-		CCNA_02891	0.28	-2.1
3,038,591	-		CCNA_02891	0.28	+0.6
3,038,591	-		CCNA_02891	0.28	-1.8
3,038,591	-		CCNA_02891	0.28	-0.9
3,038,591	-		CCNA_02891	0.28	+0.4
3,038,591	-		CCNA_02891	0.28	-1.2
3,038,593	+		CCNA_02891	0.28	+0.9
3,038,606	-		CCNA_02891	0.29	-0.9
3,038,609	+		CCNA_02891	0.29	-0.1
3,038,609	+		CCNA_02891	0.29	-1.8
3,038,617	-		CCNA_02891	0.29	+0.4
3,038,619	+		CCNA_02891	0.29	-1.0
3,038,627	-		CCNA_02891	0.30	+0.1
3,038,627	-		CCNA_02891	0.30	+1.2
3,038,653	+		CCNA_02891	0.31	-0.9
3,038,661	-		CCNA_02891	0.31	+0.9
3,038,661	-		CCNA_02891	0.31	-0.1
3,038,663	+		CCNA_02891	0.32	+1.7
3,038,663	+		CCNA_02891	0.32	+1.8
3,038,684	-		CCNA_02891	0.33	-1.2
3,038,709	+		CCNA_02891	0.34	+0.8
3,038,711	+		CCNA_02891	0.34	-0.9
3,038,754	-		CCNA_02891	0.36	-1.2
3,038,782	+		CCNA_02891	0.38	+0.6
3,038,802	+		CCNA_02891	0.39	+0.4
3,038,802	+		CCNA_02891	0.39	-2.3
3,038,802	+		CCNA_02891	0.39	+0.1
3,038,802	+		CCNA_02891	0.39	-2.1
3,038,802	+		CCNA_02891	0.39	-0.3
3,038,802	+		CCNA_02891	0.39	-0.5
3,038,802	+		CCNA_02891	0.39	+0.4
3,038,805	-		CCNA_02891	0.39	+1.9
3,038,810	-		CCNA_02891	0.39	-0.4
3,038,810	-		CCNA_02891	0.39	-0.8
3,038,810	-		CCNA_02891	0.39	+1.3
3,038,810	-		CCNA_02891	0.39	-0.5
3,038,810	-		CCNA_02891	0.39	+2.9
3,038,810	-		CCNA_02891	0.39	-0.9
3,038,857	+		CCNA_02891	0.42	+1.9
3,038,886	+		CCNA_02891	0.43	-0.1
3,038,886	+		CCNA_02891	0.43	-1.4
3,038,894	-		CCNA_02891	0.44	-0.6
3,038,894	-		CCNA_02891	0.44	-1.2
3,038,901	-		CCNA_02891	0.44	+1.5
3,038,915	+		CCNA_02891	0.45	-0.6
3,038,917	-		CCNA_02891	0.45	+0.9
3,038,925	+		CCNA_02891	0.45	+0.9
3,038,925	-		CCNA_02891	0.45	-0.1