Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02666

Experiment: PYE with nitrite 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 2.5 mM
2,818,886	-		CCNA_02665	0.11	+0.7
2,818,930	+		CCNA_02665	0.15	-0.1
2,818,935	+		CCNA_02665	0.16	+0.8
2,818,959	+		CCNA_02665	0.18	+1.3
2,818,967	+		CCNA_02665	0.19	+1.1
2,818,973	+		CCNA_02665	0.19	+0.1
2,818,993	+		CCNA_02665	0.21	+1.3
2,818,993	+		CCNA_02665	0.21	+1.3
2,819,016	-		CCNA_02665	0.23	-1.2
2,819,048	-		CCNA_02665	0.26	-0.9
2,819,066	+		CCNA_02665	0.27	+1.2
2,819,081	-		CCNA_02665	0.29	-2.4
2,819,109	-		CCNA_02665	0.31	+0.5
2,819,109	-		CCNA_02665	0.31	+0.1
2,819,114	-		CCNA_02665	0.32	-0.9
2,819,118	+		CCNA_02665	0.32	+1.3
2,819,142	+		CCNA_02665	0.34	+0.6
2,819,154	+		CCNA_02665	0.35	+1.2
2,819,172	+		CCNA_02665	0.37	+1.1
2,819,172	+		CCNA_02665	0.37	+1.0
2,819,177	+		CCNA_02665	0.37	+1.7
2,819,177	+		CCNA_02665	0.37	+1.2
2,819,177	+		CCNA_02665	0.37	+1.0
2,819,177	+		CCNA_02665	0.37	+1.3
2,819,177	+		CCNA_02665	0.37	-0.1
2,819,177	+		CCNA_02665	0.37	+0.7
2,819,185	-		CCNA_02665	0.38	+0.3
2,819,190	+		CCNA_02665	0.39	+3.1
2,819,190	+		CCNA_02665	0.39	+0.6
2,819,190	+		CCNA_02665	0.39	+1.7
2,819,198	-		CCNA_02665	0.39	-0.4
2,819,198	-		CCNA_02665	0.39	-2.0
2,819,202	+		CCNA_02665	0.40	+2.1
2,819,207	+		CCNA_02665	0.40	+1.4
2,819,210	-		CCNA_02665	0.40	+3.3
2,819,232	+		CCNA_02665	0.42	+1.4
2,819,240	-		CCNA_02665	0.43	+0.7
2,819,249	+		CCNA_02665	0.44	-0.2
2,819,249	+		CCNA_02665	0.44	+0.9
2,819,249	+		CCNA_02665	0.44	+2.7
2,819,249	+		CCNA_02665	0.44	+0.1
2,819,249	+		CCNA_02665	0.44	+0.1
2,819,257	-		CCNA_02665	0.45	+0.5
2,819,257	-		CCNA_02665	0.45	-0.0
2,819,257	-		CCNA_02665	0.45	-0.6
2,819,339	+		CCNA_02665	0.52	+1.8
2,819,341	+		CCNA_02665	0.52	-0.2
2,819,346	+		CCNA_02665	0.53	-0.7
2,819,346	+		CCNA_02665	0.53	+0.5
2,819,346	+		CCNA_02665	0.53	+0.6
2,819,349	-		CCNA_02665	0.53	+0.3
2,819,416	+		CCNA_02665	0.59	+0.7
2,819,432	-		CCNA_02665	0.60	-1.3
2,819,469	+		CCNA_02665	0.64	+1.3
2,819,469	+		CCNA_02665	0.64	+1.9
2,819,472	-		CCNA_02665	0.64	+1.3
2,819,472	-		CCNA_02665	0.64	+0.1
2,819,477	-		CCNA_02665	0.64	+0.7
2,819,477	-		CCNA_02665	0.64	-1.7
2,819,477	-		CCNA_02665	0.64	-0.8
2,819,501	+		CCNA_02665	0.66	+0.7
2,819,501	+		CCNA_02665	0.66	+1.0
2,819,501	+		CCNA_02665	0.66	+1.5
2,819,501	+		CCNA_02665	0.66	+1.3
2,819,509	-		CCNA_02665	0.67	-2.1
2,819,533	-		CCNA_02665	0.69	-0.4
2,819,533	-		CCNA_02665	0.69	+0.4
2,819,539	-		CCNA_02665	0.70	-2.7
2,819,591	+		CCNA_02665	0.75	+1.0
2,819,609	-		CCNA_02665	0.76	-0.6
2,819,609	-		CCNA_02665	0.76	+0.1
2,819,609	-		CCNA_02665	0.76	-1.4
2,819,633	-		CCNA_02665	0.78	+1.7
2,819,658	-		CCNA_02665	0.81	+1.1
2,819,659	+		CCNA_02665	0.81	+0.8
2,819,754	+		CCNA_02665	0.89	+1.6
2,819,762	+				+0.4
2,819,771	-				+1.7
2,819,771	-				-1.6
2,819,785	+				+1.1
2,819,855	-				+0.1
2,819,888	+				+1.6
2,819,888	+				+1.0
2,819,896	-				-1.2
2,819,896	-				-1.7
2,819,896	-				+0.1
2,819,898	+				+0.8
2,819,898	+				+0.7
2,819,898	+				+1.5
2,819,898	+				+0.6
2,819,898	+				+2.1
2,819,906	-				-0.9
2,819,931	+		CCNA_02666	0.17	-0.3
2,819,967	-		CCNA_02666	0.28	+2.3
2,819,973	-		CCNA_02666	0.30	-1.7
2,819,993	+		CCNA_02666	0.36	+1.1
2,820,001	-		CCNA_02666	0.38	-2.6
2,820,023	+		CCNA_02666	0.45	+1.2
2,820,034	+		CCNA_02666	0.48	+1.7
2,820,047	+		CCNA_02666	0.52	+0.7
2,820,049	+		CCNA_02666	0.52	+1.4
2,820,049	+		CCNA_02666	0.52	+1.2
2,820,050	+		CCNA_02666	0.53	+1.3
2,820,057	+		CCNA_02666	0.55	+0.4
2,820,075	-		CCNA_02666	0.60	+0.3
2,820,094	+		CCNA_02666	0.66	+0.9
2,820,102	-		CCNA_02666	0.68	-0.8
2,820,104	+		CCNA_02666	0.69	+1.1
2,820,139	+		CCNA_02666	0.79	+1.2
2,820,157	+		CCNA_02666	0.85	+1.3
2,820,160	-		CCNA_02666	0.85	+1.3
2,820,162	+		CCNA_02666	0.86	+1.7
2,820,170	-		CCNA_02666	0.88	+0.2
2,820,203	+				+0.9
2,820,308	-		CCNA_02667	0.21	-0.6
2,820,336	+		CCNA_02667	0.27	+1.6
2,820,343	+		CCNA_02667	0.29	+1.0
2,820,345	+		CCNA_02667	0.29	+1.5
2,820,363	-		CCNA_02667	0.33	+0.1
2,820,385	+		CCNA_02667	0.38	+0.9
2,820,406	+		CCNA_02667	0.43	+1.9
2,820,414	-		CCNA_02667	0.45	+0.1
2,820,416	+		CCNA_02667	0.45	+2.2
2,820,424	-		CCNA_02667	0.47	+1.1
2,820,430	+		CCNA_02667	0.48	+0.4
2,820,431	+		CCNA_02667	0.48	+3.5
2,820,437	-		CCNA_02667	0.50	-0.6
2,820,447	+		CCNA_02667	0.52	+1.1
2,820,447	+		CCNA_02667	0.52	+1.3
2,820,447	+		CCNA_02667	0.52	+0.9
2,820,447	+		CCNA_02667	0.52	+1.6
2,820,455	-		CCNA_02667	0.54	-0.9
2,820,455	-		CCNA_02667	0.54	-0.6
2,820,480	+		CCNA_02667	0.59	+0.9
2,820,539	-		CCNA_02667	0.72	-1.2
2,820,584	-		CCNA_02667	0.82	-1.2
2,820,609	+		CCNA_02667	0.88	+1.5
2,820,609	+		CCNA_02667	0.88	+1.2
2,820,617	-		CCNA_02667	0.90	+0.5
2,820,642	+				+1.2
2,820,642	+				+1.3
2,820,657	+				+0.6
2,820,657	+				-0.6
2,820,657	+				+0.0
2,820,657	+				+0.5
2,820,657	+				+0.6
2,820,657	+				+0.5
2,820,663	+				+0.1
2,820,663	+				-0.6
2,820,663	+				-0.3
2,820,663	+				-0.3
2,820,663	+				-2.0
2,820,665	-				-0.6
2,820,665	-				-0.3
2,820,665	-				-2.4
2,820,671	-				-0.7
2,820,671	-				-0.6
2,820,671	-				+0.7
2,820,702	+				-2.4
2,820,709	-				-1.6
2,820,831	+		CCNA_02668	0.26	-1.9
2,820,858	+		CCNA_02668	0.31	+0.7
2,820,858	-		CCNA_02668	0.31	+0.5
2,820,866	-		CCNA_02668	0.32	-1.4
2,820,888	-		CCNA_02668	0.35	-0.3
2,820,888	-		CCNA_02668	0.35	-0.4
2,820,888	-		CCNA_02668	0.35	-0.4
2,820,888	-		CCNA_02668	0.35	+0.3
2,820,891	+		CCNA_02668	0.36	+0.7
2,820,901	+		CCNA_02668	0.37	+1.1
2,820,915	+		CCNA_02668	0.40	-0.9
2,820,926	+		CCNA_02668	0.41	-0.9
2,820,929	-		CCNA_02668	0.42	-0.1
2,820,945	-		CCNA_02668	0.44	-0.1
2,820,965	-		CCNA_02668	0.48	-1.7
2,820,973	+		CCNA_02668	0.49	-0.9
2,821,010	-		CCNA_02668	0.55	-1.4
2,821,030	-		CCNA_02668	0.58	+0.7
2,821,048	+		CCNA_02668	0.61	-1.9
2,821,048	+		CCNA_02668	0.61	-2.2
2,821,055	-		CCNA_02668	0.62	-1.4
2,821,056	-		CCNA_02668	0.62	+0.1
2,821,066	+		CCNA_02668	0.64	+1.7
2,821,075	-		CCNA_02668	0.65	+0.1
2,821,077	+		CCNA_02668	0.65	-1.2
2,821,103	+		CCNA_02668	0.70	-2.6
2,821,103	+		CCNA_02668	0.70	-1.3
2,821,103	+		CCNA_02668	0.70	-2.1
2,821,113	+		CCNA_02668	0.71	-1.4
2,821,124	+		CCNA_02668	0.73	-0.9
2,821,137	+		CCNA_02668	0.75	-1.6
2,821,137	-		CCNA_02668	0.75	-0.9
2,821,160	-		CCNA_02668	0.79	-0.9
2,821,179	+		CCNA_02668	0.82	+0.1
2,821,189	+		CCNA_02668	0.83	+0.3
2,821,197	-		CCNA_02668	0.84	-0.9
2,821,200	+		CCNA_02668	0.85	-0.6
2,821,203	-		CCNA_02668	0.85	+0.2