Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31920 and AZOBR_RS31925 are separated by 97 nucleotides AZOBR_RS31925 and AZOBR_RS31930 are separated by 438 nucleotides
AZOBR_RS31920: AZOBR_RS31920 - hypothetical protein, at 526,352 to 526,612
_RS31920
AZOBR_RS31925: AZOBR_RS31925 - MerR family transcriptional regulator, at 526,710 to 527,171
_RS31925
AZOBR_RS31930: AZOBR_RS31930 - transcriptional regulator, at 527,610 to 528,365
_RS31930
Position (kb) 527
528
529 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 526.803 kb on + strand, within AZOBR_RS31925 at 526.804 kb on - strand, within AZOBR_RS31925 at 527.282 kb on + strand at 527.463 kb on + strand at 527.463 kb on + strand at 527.758 kb on + strand, within AZOBR_RS31930 at 527.759 kb on - strand, within AZOBR_RS31930 at 528.040 kb on + strand, within AZOBR_RS31930 at 528.040 kb on + strand, within AZOBR_RS31930 at 528.040 kb on + strand, within AZOBR_RS31930 at 528.040 kb on + strand, within AZOBR_RS31930 at 528.040 kb on + strand, within AZOBR_RS31930 at 528.041 kb on - strand, within AZOBR_RS31930 at 528.041 kb on - strand, within AZOBR_RS31930 at 528.169 kb on + strand, within AZOBR_RS31930 at 528.169 kb on + strand, within AZOBR_RS31930 at 528.169 kb on + strand, within AZOBR_RS31930 at 528.169 kb on + strand, within AZOBR_RS31930 at 528.170 kb on - strand, within AZOBR_RS31930 at 528.170 kb on - strand, within AZOBR_RS31930 at 528.170 kb on - strand, within AZOBR_RS31930 at 528.170 kb on - strand, within AZOBR_RS31930 at 528.170 kb on - strand, within AZOBR_RS31930 at 528.170 kb on - strand, within AZOBR_RS31930 at 528.170 kb on - strand, within AZOBR_RS31930 at 528.220 kb on + strand, within AZOBR_RS31930 at 528.220 kb on + strand, within AZOBR_RS31930 at 528.220 kb on + strand, within AZOBR_RS31930 at 528.220 kb on + strand, within AZOBR_RS31930 at 528.221 kb on - strand, within AZOBR_RS31930 at 528.221 kb on - strand, within AZOBR_RS31930 at 528.221 kb on - strand, within AZOBR_RS31930 at 528.221 kb on - strand, within AZOBR_RS31930 at 528.565 kb on + strand at 528.566 kb on - strand at 528.706 kb on + strand at 528.706 kb on + strand at 528.808 kb on + strand at 528.809 kb on - strand at 529.042 kb on + strand at 529.043 kb on - strand at 529.141 kb on + strand at 529.141 kb on + strand at 529.142 kb on - strand at 529.142 kb on - strand at 529.142 kb on - strand at 529.142 kb on - strand at 529.142 kb on - strand at 529.313 kb on - strand at 529.313 kb on - strand at 529.313 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 526,803 + AZOBR_RS31925 0.20 +3.1 526,804 - AZOBR_RS31925 0.20 -4.1 527,282 + -0.4 527,463 + +1.7 527,463 + +0.1 527,758 + AZOBR_RS31930 0.20 +0.7 527,759 - AZOBR_RS31930 0.20 +0.1 528,040 + AZOBR_RS31930 0.57 +0.9 528,040 + AZOBR_RS31930 0.57 -0.0 528,040 + AZOBR_RS31930 0.57 +0.8 528,040 + AZOBR_RS31930 0.57 -3.0 528,040 + AZOBR_RS31930 0.57 +0.7 528,041 - AZOBR_RS31930 0.57 +0.1 528,041 - AZOBR_RS31930 0.57 +1.9 528,169 + AZOBR_RS31930 0.74 -3.6 528,169 + AZOBR_RS31930 0.74 +0.2 528,169 + AZOBR_RS31930 0.74 -0.7 528,169 + AZOBR_RS31930 0.74 -1.6 528,170 - AZOBR_RS31930 0.74 +1.9 528,170 - AZOBR_RS31930 0.74 +0.7 528,170 - AZOBR_RS31930 0.74 +1.8 528,170 - AZOBR_RS31930 0.74 -0.1 528,170 - AZOBR_RS31930 0.74 +0.8 528,170 - AZOBR_RS31930 0.74 +0.4 528,170 - AZOBR_RS31930 0.74 -0.2 528,220 + AZOBR_RS31930 0.81 +0.1 528,220 + AZOBR_RS31930 0.81 +0.5 528,220 + AZOBR_RS31930 0.81 +0.4 528,220 + AZOBR_RS31930 0.81 +0.9 528,221 - AZOBR_RS31930 0.81 +1.0 528,221 - AZOBR_RS31930 0.81 -3.8 528,221 - AZOBR_RS31930 0.81 +0.8 528,221 - AZOBR_RS31930 0.81 +0.8 528,565 + -2.7 528,566 - -1.7 528,706 + -0.6 528,706 + -0.0 528,808 + -1.5 528,809 - -0.7 529,042 + -0.7 529,043 - -2.6 529,141 + +1.0 529,141 + +0.0 529,142 - -1.9 529,142 - +0.3 529,142 - -1.3 529,142 - +0.5 529,142 - -1.5 529,313 - +0.3 529,313 - -0.8 529,313 - -4.2
Or see this region's nucleotide sequence