Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31305 and AZOBR_RS31310 are separated by 146 nucleotides AZOBR_RS31310 and AZOBR_RS31315 are separated by 70 nucleotides
AZOBR_RS31305: AZOBR_RS31305 - hypothetical protein, at 390,220 to 390,675
_RS31305
AZOBR_RS31310: AZOBR_RS31310 - transcriptional regulator, at 390,822 to 391,457
_RS31310
AZOBR_RS31315: AZOBR_RS31315 - RND transporter, at 391,528 to 392,724
_RS31315
Position (kb) 390
391
392 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 389.831 kb on + strand at 390.768 kb on + strand at 390.768 kb on + strand at 390.769 kb on - strand at 390.769 kb on - strand at 390.794 kb on - strand at 390.805 kb on - strand at 390.811 kb on + strand at 390.986 kb on - strand, within AZOBR_RS31310 at 390.987 kb on + strand, within AZOBR_RS31310 at 390.987 kb on + strand, within AZOBR_RS31310 at 390.987 kb on + strand, within AZOBR_RS31310 at 390.987 kb on + strand, within AZOBR_RS31310 at 390.988 kb on - strand, within AZOBR_RS31310 at 390.988 kb on - strand, within AZOBR_RS31310 at 390.988 kb on - strand, within AZOBR_RS31310 at 391.101 kb on + strand, within AZOBR_RS31310 at 391.101 kb on + strand, within AZOBR_RS31310 at 391.101 kb on + strand, within AZOBR_RS31310 at 391.102 kb on - strand, within AZOBR_RS31310 at 391.155 kb on + strand, within AZOBR_RS31310 at 391.156 kb on - strand, within AZOBR_RS31310 at 391.472 kb on - strand at 391.634 kb on + strand at 391.660 kb on + strand, within AZOBR_RS31315 at 391.660 kb on + strand, within AZOBR_RS31315 at 391.661 kb on - strand, within AZOBR_RS31315 at 391.661 kb on - strand, within AZOBR_RS31315 at 391.661 kb on - strand, within AZOBR_RS31315 at 391.771 kb on + strand, within AZOBR_RS31315 at 391.771 kb on + strand, within AZOBR_RS31315 at 391.771 kb on + strand, within AZOBR_RS31315 at 391.772 kb on - strand, within AZOBR_RS31315 at 391.772 kb on - strand, within AZOBR_RS31315 at 392.152 kb on + strand, within AZOBR_RS31315 at 392.153 kb on - strand, within AZOBR_RS31315 at 392.153 kb on - strand, within AZOBR_RS31315
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 389,831 + -0.1 390,768 + -1.2 390,768 + -2.2 390,769 - -0.9 390,769 - +1.1 390,794 - +1.1 390,805 - +0.6 390,811 + +1.1 390,986 - AZOBR_RS31310 0.26 -1.1 390,987 + AZOBR_RS31310 0.26 +0.6 390,987 + AZOBR_RS31310 0.26 +0.0 390,987 + AZOBR_RS31310 0.26 +0.6 390,987 + AZOBR_RS31310 0.26 +0.0 390,988 - AZOBR_RS31310 0.26 +1.1 390,988 - AZOBR_RS31310 0.26 +0.5 390,988 - AZOBR_RS31310 0.26 +1.7 391,101 + AZOBR_RS31310 0.44 -1.7 391,101 + AZOBR_RS31310 0.44 +1.0 391,101 + AZOBR_RS31310 0.44 -0.0 391,102 - AZOBR_RS31310 0.44 +1.1 391,155 + AZOBR_RS31310 0.52 +3.2 391,156 - AZOBR_RS31310 0.53 -0.2 391,472 - -1.1 391,634 + -0.6 391,660 + AZOBR_RS31315 0.11 +0.5 391,660 + AZOBR_RS31315 0.11 +0.9 391,661 - AZOBR_RS31315 0.11 +0.8 391,661 - AZOBR_RS31315 0.11 -0.2 391,661 - AZOBR_RS31315 0.11 -0.9 391,771 + AZOBR_RS31315 0.20 -0.9 391,771 + AZOBR_RS31315 0.20 +0.5 391,771 + AZOBR_RS31315 0.20 -4.7 391,772 - AZOBR_RS31315 0.20 -0.3 391,772 - AZOBR_RS31315 0.20 +0.3 392,152 + AZOBR_RS31315 0.52 -1.5 392,153 - AZOBR_RS31315 0.52 +1.4 392,153 - AZOBR_RS31315 0.52 +2.3
Or see this region's nucleotide sequence