Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26465 and AZOBR_RS26470 are separated by 98 nucleotides AZOBR_RS26470 and AZOBR_RS26475 are separated by 49 nucleotides
AZOBR_RS26465: AZOBR_RS26465 - MmgE/PrpD family protein 4, at 82,222 to 83,481
_RS26465
AZOBR_RS26470: AZOBR_RS26470 - acyl-CoA synthetase, at 83,580 to 85,094
_RS26470
AZOBR_RS26475: AZOBR_RS26475 - acyl-CoA dehydrogenase, at 85,144 to 86,316
_RS26475
Position (kb) 83
84
85
86 Strain fitness (log2 ratio) -2
-1
0
1
2 at 84.218 kb on - strand, within AZOBR_RS26470 at 84.218 kb on - strand, within AZOBR_RS26470 at 84.313 kb on + strand, within AZOBR_RS26470 at 84.496 kb on + strand, within AZOBR_RS26470 at 84.497 kb on - strand, within AZOBR_RS26470 at 84.497 kb on - strand, within AZOBR_RS26470 at 84.497 kb on - strand, within AZOBR_RS26470 at 84.572 kb on - strand, within AZOBR_RS26470 at 84.629 kb on - strand, within AZOBR_RS26470 at 84.845 kb on - strand, within AZOBR_RS26470 at 85.027 kb on + strand at 85.028 kb on - strand at 85.028 kb on - strand at 85.259 kb on + strand at 85.260 kb on - strand at 85.260 kb on - strand at 85.260 kb on - strand at 85.365 kb on - strand, within AZOBR_RS26475 at 85.365 kb on - strand, within AZOBR_RS26475 at 85.512 kb on - strand, within AZOBR_RS26475 at 85.512 kb on - strand, within AZOBR_RS26475 at 85.664 kb on + strand, within AZOBR_RS26475 at 85.664 kb on + strand, within AZOBR_RS26475 at 85.664 kb on + strand, within AZOBR_RS26475
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 84,218 - AZOBR_RS26470 0.42 +0.0 84,218 - AZOBR_RS26470 0.42 +0.9 84,313 + AZOBR_RS26470 0.48 +1.0 84,496 + AZOBR_RS26470 0.60 -0.3 84,497 - AZOBR_RS26470 0.61 +0.4 84,497 - AZOBR_RS26470 0.61 -0.9 84,497 - AZOBR_RS26470 0.61 +0.1 84,572 - AZOBR_RS26470 0.65 +1.6 84,629 - AZOBR_RS26470 0.69 -1.3 84,845 - AZOBR_RS26470 0.83 -0.6 85,027 + +2.0 85,028 - -2.5 85,028 - +0.6 85,259 + -2.0 85,260 - -0.6 85,260 - -1.2 85,260 - -0.1 85,365 - AZOBR_RS26475 0.19 -0.7 85,365 - AZOBR_RS26475 0.19 -0.3 85,512 - AZOBR_RS26475 0.31 +0.9 85,512 - AZOBR_RS26475 0.31 +1.3 85,664 + AZOBR_RS26475 0.44 -0.3 85,664 + AZOBR_RS26475 0.44 -0.3 85,664 + AZOBR_RS26475 0.44 -0.2
Or see this region's nucleotide sequence