Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25555 and AZOBR_RS25560 are separated by 97 nucleotides AZOBR_RS25560 and AZOBR_RS25565 are separated by 134 nucleotides AZOBR_RS25565 and AZOBR_RS25570 are separated by 76 nucleotides
AZOBR_RS25555: AZOBR_RS25555 - hypothetical protein, at 783,227 to 784,078
_RS25555
AZOBR_RS25560: AZOBR_RS25560 - hypothetical protein, at 784,176 to 784,658
_RS25560
AZOBR_RS25565: AZOBR_RS25565 - hypothetical protein, at 784,793 to 785,554
_RS25565
AZOBR_RS25570: AZOBR_RS25570 - hypothetical protein, at 785,631 to 786,425
_RS25570
Position (kb) 784
785 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 783.303 kb on + strand at 783.529 kb on - strand, within AZOBR_RS25555 at 783.529 kb on - strand, within AZOBR_RS25555 at 783.948 kb on + strand, within AZOBR_RS25555 at 783.948 kb on + strand, within AZOBR_RS25555 at 783.949 kb on - strand, within AZOBR_RS25555 at 783.949 kb on - strand, within AZOBR_RS25555 at 783.949 kb on - strand, within AZOBR_RS25555 at 783.949 kb on - strand, within AZOBR_RS25555 at 783.952 kb on - strand, within AZOBR_RS25555 at 783.952 kb on - strand, within AZOBR_RS25555 at 783.952 kb on - strand, within AZOBR_RS25555 at 784.292 kb on - strand, within AZOBR_RS25560 at 784.523 kb on + strand, within AZOBR_RS25560 at 784.686 kb on + strand at 785.145 kb on + strand, within AZOBR_RS25565 at 785.145 kb on + strand, within AZOBR_RS25565 at 785.145 kb on + strand, within AZOBR_RS25565 at 785.145 kb on + strand, within AZOBR_RS25565 at 785.145 kb on + strand, within AZOBR_RS25565 at 785.146 kb on - strand, within AZOBR_RS25565 at 785.146 kb on - strand, within AZOBR_RS25565 at 785.146 kb on - strand, within AZOBR_RS25565 at 785.146 kb on - strand, within AZOBR_RS25565 at 785.146 kb on - strand, within AZOBR_RS25565 at 785.146 kb on - strand, within AZOBR_RS25565 at 785.146 kb on - strand, within AZOBR_RS25565 at 785.146 kb on - strand, within AZOBR_RS25565 at 785.146 kb on - strand, within AZOBR_RS25565 at 785.632 kb on + strand at 785.633 kb on - strand at 785.633 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 783,303 + -0.5 783,529 - AZOBR_RS25555 0.35 +1.2 783,529 - AZOBR_RS25555 0.35 -0.0 783,948 + AZOBR_RS25555 0.85 -0.7 783,948 + AZOBR_RS25555 0.85 -1.0 783,949 - AZOBR_RS25555 0.85 +0.1 783,949 - AZOBR_RS25555 0.85 +0.1 783,949 - AZOBR_RS25555 0.85 +0.1 783,949 - AZOBR_RS25555 0.85 -0.5 783,952 - AZOBR_RS25555 0.85 -3.5 783,952 - AZOBR_RS25555 0.85 +0.7 783,952 - AZOBR_RS25555 0.85 +0.0 784,292 - AZOBR_RS25560 0.24 -3.6 784,523 + AZOBR_RS25560 0.72 -0.5 784,686 + -3.0 785,145 + AZOBR_RS25565 0.46 -0.1 785,145 + AZOBR_RS25565 0.46 -1.0 785,145 + AZOBR_RS25565 0.46 -0.4 785,145 + AZOBR_RS25565 0.46 -0.6 785,145 + AZOBR_RS25565 0.46 +1.2 785,146 - AZOBR_RS25565 0.46 -0.2 785,146 - AZOBR_RS25565 0.46 -1.0 785,146 - AZOBR_RS25565 0.46 +1.0 785,146 - AZOBR_RS25565 0.46 -0.1 785,146 - AZOBR_RS25565 0.46 -0.6 785,146 - AZOBR_RS25565 0.46 +0.3 785,146 - AZOBR_RS25565 0.46 -2.5 785,146 - AZOBR_RS25565 0.46 +0.4 785,146 - AZOBR_RS25565 0.46 +0.4 785,632 + +0.8 785,633 - -1.8 785,633 - -2.0
Or see this region's nucleotide sequence