Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23530 and AZOBR_RS23535 are separated by 65 nucleotides AZOBR_RS23535 and AZOBR_RS23540 are separated by 152 nucleotides
AZOBR_RS23530: AZOBR_RS23530 - putative Major facilitator family transporter, at 307,321 to 308,514
_RS23530
AZOBR_RS23535: AZOBR_RS23535 - exodeoxyribonuclease V, at 308,580 to 309,776
_RS23535
AZOBR_RS23540: AZOBR_RS23540 - tetrathionate reductase subunit A, at 309,929 to 313,036
_RS23540
Position (kb) 308
309
310 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 307.663 kb on + strand, within AZOBR_RS23530 at 307.663 kb on + strand, within AZOBR_RS23530 at 307.663 kb on + strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.744 kb on + strand, within AZOBR_RS23530 at 307.744 kb on + strand, within AZOBR_RS23530 at 307.744 kb on + strand, within AZOBR_RS23530 at 307.844 kb on - strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.928 kb on - strand, within AZOBR_RS23530 at 308.272 kb on + strand, within AZOBR_RS23530 at 308.273 kb on - strand, within AZOBR_RS23530 at 308.384 kb on + strand, within AZOBR_RS23530 at 308.431 kb on + strand at 308.542 kb on + strand at 308.543 kb on - strand at 308.851 kb on - strand, within AZOBR_RS23535 at 309.459 kb on - strand, within AZOBR_RS23535 at 309.522 kb on + strand, within AZOBR_RS23535 at 309.523 kb on - strand, within AZOBR_RS23535 at 309.682 kb on - strand at 309.682 kb on - strand at 310.333 kb on - strand, within AZOBR_RS23540 at 310.503 kb on + strand, within AZOBR_RS23540 at 310.744 kb on - strand, within AZOBR_RS23540
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 307,663 + AZOBR_RS23530 0.29 -0.1 307,663 + AZOBR_RS23530 0.29 -1.3 307,663 + AZOBR_RS23530 0.29 -0.6 307,664 - AZOBR_RS23530 0.29 -0.4 307,664 - AZOBR_RS23530 0.29 +1.2 307,664 - AZOBR_RS23530 0.29 +0.2 307,664 - AZOBR_RS23530 0.29 +0.0 307,744 + AZOBR_RS23530 0.35 -1.4 307,744 + AZOBR_RS23530 0.35 -3.4 307,744 + AZOBR_RS23530 0.35 +0.4 307,844 - AZOBR_RS23530 0.44 +2.7 307,927 + AZOBR_RS23530 0.51 -0.1 307,927 + AZOBR_RS23530 0.51 +3.9 307,927 + AZOBR_RS23530 0.51 +1.6 307,927 + AZOBR_RS23530 0.51 +0.9 307,927 + AZOBR_RS23530 0.51 -1.0 307,927 + AZOBR_RS23530 0.51 +0.3 307,928 - AZOBR_RS23530 0.51 +0.2 308,272 + AZOBR_RS23530 0.80 -0.5 308,273 - AZOBR_RS23530 0.80 -1.4 308,384 + AZOBR_RS23530 0.89 -1.6 308,431 + -1.3 308,542 + +0.1 308,543 - -2.5 308,851 - AZOBR_RS23535 0.23 -1.6 309,459 - AZOBR_RS23535 0.73 -0.4 309,522 + AZOBR_RS23535 0.79 -0.2 309,523 - AZOBR_RS23535 0.79 +0.2 309,682 - +0.5 309,682 - +1.9 310,333 - AZOBR_RS23540 0.13 +2.2 310,503 + AZOBR_RS23540 0.18 +0.8 310,744 - AZOBR_RS23540 0.26 +0.2
Or see this region's nucleotide sequence