Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS21770
Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,659,150 | - | AZOBR_RS21765 | 0.20 | +0.4 | |
1,659,461 | + | AZOBR_RS21765 | 0.51 | -0.1 | |
1,659,461 | + | AZOBR_RS21765 | 0.51 | -0.4 | |
1,659,462 | - | AZOBR_RS21765 | 0.51 | +0.2 | |
1,659,462 | - | AZOBR_RS21765 | 0.51 | +0.8 | |
1,659,464 | + | AZOBR_RS21765 | 0.51 | -4.7 | |
1,659,464 | + | AZOBR_RS21765 | 0.51 | +0.7 | |
1,659,642 | - | AZOBR_RS21765 | 0.69 | -1.6 | |
1,659,642 | - | AZOBR_RS21765 | 0.69 | +1.9 | |
1,660,057 | + | AZOBR_RS21770 | 0.10 | -1.8 | |
1,660,058 | - | AZOBR_RS21770 | 0.10 | +0.9 | |
1,660,513 | + | AZOBR_RS21770 | 0.59 | +2.0 | |
1,660,514 | - | AZOBR_RS21770 | 0.59 | +0.3 | |
1,660,561 | + | AZOBR_RS21770 | 0.64 | +0.3 | |
1,660,561 | + | AZOBR_RS21770 | 0.64 | +1.7 | |
1,661,580 | + | AZOBR_RS21775 | 0.69 | +0.7 | |
1,661,581 | - | AZOBR_RS21775 | 0.69 | +0.2 | |
1,661,581 | - | AZOBR_RS21775 | 0.69 | +1.0 | |
1,661,644 | - | AZOBR_RS21775 | 0.75 | +0.8 | |
1,661,844 | + | -1.2 |
Or see this region's nucleotide sequence