Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS19675

Experiment: Sisomicin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.01 mg/ml
1,182,867	+		AZOBR_RS19670	0.32	-0.9
1,182,867	+		AZOBR_RS19670	0.32	-0.6
1,182,868	-		AZOBR_RS19670	0.33	-2.9
1,182,981	+		AZOBR_RS19670	0.42	-3.8
1,182,981	+		AZOBR_RS19670	0.42	+1.0
1,182,982	-		AZOBR_RS19670	0.42	-3.9
1,183,255	-		AZOBR_RS19670	0.65	-2.8
1,183,608	+				+2.0
1,183,608	+				-0.2
1,183,609	-				-0.2
1,183,609	-				-3.9
1,183,609	-				+0.1
1,183,825	+				+0.1
1,183,826	-				-0.5
1,183,835	+				+0.4
1,183,835	+				+0.6
1,183,835	+				-1.6
1,183,836	-				-0.3
1,184,015	+		AZOBR_RS19675	0.14	-1.3
1,184,015	+		AZOBR_RS19675	0.14	+0.6
1,184,015	+		AZOBR_RS19675	0.14	+0.2
1,184,165	+		AZOBR_RS19675	0.27	+1.0
1,184,238	-		AZOBR_RS19675	0.33	-3.5
1,184,256	-		AZOBR_RS19675	0.34	-0.5
1,184,375	+		AZOBR_RS19675	0.44	+1.0
1,184,376	-		AZOBR_RS19675	0.44	-1.8
1,184,495	+		AZOBR_RS19675	0.54	-0.7
1,184,495	+		AZOBR_RS19675	0.54	-1.5
1,184,495	+		AZOBR_RS19675	0.54	-0.2
1,184,496	-		AZOBR_RS19675	0.54	-2.0
1,184,555	+		AZOBR_RS19675	0.59	+0.8
1,184,669	+		AZOBR_RS19675	0.69	+0.3
1,184,912	+		AZOBR_RS19675	0.89	+0.7
1,185,108	-				+1.3
1,185,228	+				+0.1
1,185,229	-				-0.9
1,185,230	+				-0.5
1,185,230	+				-2.7
1,185,230	+				-1.8
1,185,230	+				+1.0
1,185,230	+				+0.2
1,185,230	+				+1.3
1,185,230	+				+0.4
1,185,231	-				-0.6
1,185,231	-				+0.8
1,185,231	-				+1.2
1,185,231	-				-0.9
1,185,231	-				-1.9
1,185,231	-				+0.7
1,185,231	-				+1.7
1,185,231	-				-0.0
1,185,231	-				-2.0
1,185,231	-				-0.5
1,185,629	+		AZOBR_RS19680	0.35	-3.1
1,185,629	+		AZOBR_RS19680	0.35	-3.7
1,185,629	+		AZOBR_RS19680	0.35	+0.1
1,185,630	-		AZOBR_RS19680	0.35	+0.3
1,185,630	-		AZOBR_RS19680	0.35	+1.2
1,185,630	-		AZOBR_RS19680	0.35	-0.0
1,185,630	-		AZOBR_RS19680	0.35	+3.2
1,185,630	-		AZOBR_RS19680	0.35	-1.1
1,185,630	-		AZOBR_RS19680	0.35	-2.9
1,185,630	-		AZOBR_RS19680	0.35	-1.0