Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18500 and AZOBR_RS18505 are separated by 410 nucleotides AZOBR_RS18505 and AZOBR_RS18510 are separated by 965 nucleotides
AZOBR_RS18500: AZOBR_RS18500 - hypothetical protein, at 916,713 to 920,411
_RS18500
AZOBR_RS18505: AZOBR_RS18505 - hypothetical protein, at 920,822 to 921,049
_RS18505
AZOBR_RS18510: AZOBR_RS18510 - plasmid replication protein, at 922,015 to 922,944
_RS18510
Position (kb) 920
921
922 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 920.219 kb on + strand at 920.478 kb on + strand at 920.478 kb on + strand at 920.479 kb on - strand at 920.575 kb on + strand at 920.575 kb on + strand at 920.613 kb on + strand at 920.613 kb on + strand at 920.613 kb on + strand at 920.614 kb on - strand at 920.614 kb on - strand at 920.614 kb on - strand at 920.614 kb on - strand at 920.614 kb on - strand at 920.614 kb on - strand at 920.614 kb on - strand at 920.614 kb on - strand at 921.036 kb on + strand at 921.036 kb on + strand at 921.036 kb on + strand at 921.036 kb on - strand at 921.037 kb on - strand at 921.037 kb on - strand at 921.037 kb on - strand at 921.069 kb on + strand at 921.070 kb on - strand at 921.070 kb on - strand at 921.159 kb on + strand at 921.159 kb on + strand at 921.159 kb on + strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.196 kb on - strand at 921.196 kb on - strand at 921.196 kb on - strand at 921.196 kb on - strand at 921.273 kb on + strand at 921.273 kb on + strand at 921.273 kb on + strand at 921.273 kb on + strand at 921.274 kb on - strand at 921.274 kb on - strand at 921.276 kb on + strand at 921.277 kb on - strand at 921.277 kb on - strand at 921.277 kb on - strand at 921.277 kb on - strand at 921.327 kb on + strand at 921.327 kb on + strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.330 kb on + strand at 921.330 kb on + strand at 921.331 kb on - strand at 921.331 kb on - strand at 921.390 kb on + strand at 921.391 kb on - strand at 921.391 kb on - strand at 921.459 kb on + strand at 921.460 kb on - strand at 921.460 kb on - strand at 921.460 kb on - strand at 921.531 kb on + strand at 921.531 kb on + strand at 921.532 kb on - strand at 921.636 kb on + strand at 921.637 kb on - strand at 921.637 kb on - strand at 921.637 kb on - strand at 921.637 kb on - strand at 921.637 kb on - strand at 921.688 kb on - strand at 921.748 kb on - strand at 921.748 kb on - strand at 921.748 kb on - strand at 921.748 kb on - strand at 921.820 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 920,219 + -0.2 920,478 + +0.7 920,478 + +0.2 920,479 - -0.0 920,575 + -0.8 920,575 + -2.2 920,613 + +0.7 920,613 + +1.0 920,613 + +0.0 920,614 - -1.3 920,614 - +1.0 920,614 - -2.7 920,614 - -1.6 920,614 - -2.2 920,614 - -0.2 920,614 - +1.4 920,614 - -0.4 921,036 + +1.4 921,036 + -1.0 921,036 + +0.7 921,036 - -0.1 921,037 - -3.7 921,037 - -2.9 921,037 - -0.4 921,069 + -0.7 921,070 - -0.7 921,070 - -0.2 921,159 + -0.6 921,159 + +1.0 921,159 + -3.3 921,160 - -1.0 921,160 - -1.4 921,160 - -3.3 921,160 - +0.7 921,160 - +0.3 921,160 - -0.2 921,160 - -2.7 921,196 - -2.7 921,196 - -0.7 921,196 - -0.8 921,196 - -1.6 921,273 + -1.8 921,273 + +0.8 921,273 + +0.8 921,273 + +2.6 921,274 - +0.9 921,274 - +0.8 921,276 + -3.5 921,277 - -2.6 921,277 - +0.6 921,277 - +1.0 921,277 - +1.4 921,327 + +1.6 921,327 + +0.0 921,328 - -2.6 921,328 - -2.9 921,328 - -2.5 921,328 - +0.4 921,328 - -0.2 921,328 - -0.2 921,330 + -0.1 921,330 + -0.5 921,331 - -2.2 921,331 - -0.3 921,390 + +1.0 921,391 - +0.7 921,391 - +0.6 921,459 + +1.0 921,460 - +0.3 921,460 - +0.2 921,460 - +0.7 921,531 + +0.1 921,531 + -0.2 921,532 - -0.8 921,636 + -0.7 921,637 - +0.0 921,637 - +1.9 921,637 - -3.6 921,637 - +0.2 921,637 - +2.1 921,688 - -3.6 921,748 - -2.4 921,748 - -1.0 921,748 - +1.1 921,748 - -1.7 921,820 - +0.2
Or see this region's nucleotide sequence