Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS14445

Experiment: Sisomicin 0.01 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS14440 and AZOBR_RS14445 are separated by 301 nucleotidesAZOBR_RS14445 and AZOBR_RS14450 are separated by 305 nucleotides AZOBR_RS14440: AZOBR_RS14440 - ATPase AAA, at 12,985 to 14,385 _RS14440 AZOBR_RS14445: AZOBR_RS14445 - hypothetical protein, at 14,687 to 14,881 _RS14445 AZOBR_RS14450: AZOBR_RS14450 - potassium transporter TrkA, at 15,187 to 16,563 _RS14450 Position (kb) 14 15Strain fitness (log2 ratio) -1 0 1at 14.700 kb on - strandat 14.957 kb on + strandat 15.105 kb on + strandat 15.148 kb on + strandat 15.496 kb on + strand, within AZOBR_RS14450at 15.817 kb on + strand, within AZOBR_RS14450

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Per-strain Table

Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml
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14,700 - -0.4
14,957 + -1.7
15,105 + -0.3
15,148 + +0.3
15,496 + AZOBR_RS14450 0.22 -0.8
15,817 + AZOBR_RS14450 0.46 -1.5

Or see this region's nucleotide sequence