Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13080 and AZOBR_RS13085 overlap by 4 nucleotides
AZOBR_RS13080: AZOBR_RS13080 - putative MFS superfamily multidrug transport protein, at 2,760,906 to 2,762,150
_RS13080
AZOBR_RS13085: AZOBR_RS13085 - putative sulfate ester transport system substrate-binding protein, at 2,762,147 to 2,763,202
_RS13085
Position (kb)
2762
2763
2764 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2761.260 kb on + strand, within AZOBR_RS13080 at 2761.260 kb on + strand, within AZOBR_RS13080 at 2761.261 kb on - strand, within AZOBR_RS13080 at 2761.261 kb on - strand, within AZOBR_RS13080 at 2761.404 kb on + strand, within AZOBR_RS13080 at 2761.404 kb on + strand, within AZOBR_RS13080 at 2761.405 kb on - strand, within AZOBR_RS13080 at 2761.405 kb on - strand, within AZOBR_RS13080 at 2761.566 kb on + strand, within AZOBR_RS13080 at 2761.567 kb on - strand, within AZOBR_RS13080 at 2762.354 kb on + strand, within AZOBR_RS13085 at 2762.354 kb on + strand, within AZOBR_RS13085 at 2762.354 kb on + strand, within AZOBR_RS13085 at 2762.354 kb on + strand, within AZOBR_RS13085 at 2762.355 kb on - strand, within AZOBR_RS13085 at 2762.355 kb on - strand, within AZOBR_RS13085 at 2762.355 kb on - strand, within AZOBR_RS13085 at 2762.355 kb on - strand, within AZOBR_RS13085 at 2762.420 kb on + strand, within AZOBR_RS13085 at 2762.420 kb on + strand, within AZOBR_RS13085 at 2762.785 kb on + strand, within AZOBR_RS13085 at 2762.972 kb on + strand, within AZOBR_RS13085 at 2762.973 kb on - strand, within AZOBR_RS13085 at 2763.116 kb on + strand at 2763.116 kb on + strand at 2763.116 kb on + strand at 2763.340 kb on + strand at 2763.341 kb on - strand at 2763.341 kb on - strand at 2763.388 kb on + strand at 2763.388 kb on + strand at 2763.389 kb on - strand at 2763.533 kb on - strand at 2763.592 kb on + strand at 2763.592 kb on + strand at 2763.593 kb on - strand at 2763.593 kb on - strand at 2763.593 kb on - strand at 2763.593 kb on - strand at 2763.820 kb on + strand at 2763.923 kb on - strand at 2763.923 kb on - strand at 2763.923 kb on - strand at 2764.141 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 2,761,260 + AZOBR_RS13080 0.28 -0.4 2,761,260 + AZOBR_RS13080 0.28 -1.8 2,761,261 - AZOBR_RS13080 0.29 -0.9 2,761,261 - AZOBR_RS13080 0.29 +0.1 2,761,404 + AZOBR_RS13080 0.40 +0.4 2,761,404 + AZOBR_RS13080 0.40 +0.6 2,761,405 - AZOBR_RS13080 0.40 +0.7 2,761,405 - AZOBR_RS13080 0.40 +0.3 2,761,566 + AZOBR_RS13080 0.53 +1.6 2,761,567 - AZOBR_RS13080 0.53 -0.9 2,762,354 + AZOBR_RS13085 0.20 +0.7 2,762,354 + AZOBR_RS13085 0.20 -1.3 2,762,354 + AZOBR_RS13085 0.20 +0.1 2,762,354 + AZOBR_RS13085 0.20 -0.1 2,762,355 - AZOBR_RS13085 0.20 +0.9 2,762,355 - AZOBR_RS13085 0.20 +0.5 2,762,355 - AZOBR_RS13085 0.20 +1.2 2,762,355 - AZOBR_RS13085 0.20 -1.0 2,762,420 + AZOBR_RS13085 0.26 +0.2 2,762,420 + AZOBR_RS13085 0.26 +1.4 2,762,785 + AZOBR_RS13085 0.60 -1.2 2,762,972 + AZOBR_RS13085 0.78 +2.0 2,762,973 - AZOBR_RS13085 0.78 -0.0 2,763,116 + +0.9 2,763,116 + +0.8 2,763,116 + +0.2 2,763,340 + +0.1 2,763,341 - +0.2 2,763,341 - -2.0 2,763,388 + -0.1 2,763,388 + +1.8 2,763,389 - +0.7 2,763,533 - -0.3 2,763,592 + +1.4 2,763,592 + -0.1 2,763,593 - +1.4 2,763,593 - -2.5 2,763,593 - -1.8 2,763,593 - +2.4 2,763,820 + +1.5 2,763,923 - -1.9 2,763,923 - -1.6 2,763,923 - -0.4 2,764,141 - -0.6
Or see this region's nucleotide sequence