Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS12855

Experiment: Sisomicin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.01 mg/ml
2,708,675	+		AZOBR_RS12850	0.32	-0.2
2,708,702	+		AZOBR_RS12850	0.34	+0.6
2,708,942	+		AZOBR_RS12850	0.56	-0.8
2,708,942	+		AZOBR_RS12850	0.56	-0.4
2,708,984	+		AZOBR_RS12850	0.60	+0.3
2,708,985	-		AZOBR_RS12850	0.60	-0.6
2,708,985	-		AZOBR_RS12850	0.60	+0.4
2,708,985	-		AZOBR_RS12850	0.60	-1.1
2,708,985	-		AZOBR_RS12850	0.60	-1.4
2,708,985	-		AZOBR_RS12850	0.60	+1.1
2,709,140	+		AZOBR_RS12850	0.74	+1.3
2,709,141	-		AZOBR_RS12850	0.74	-2.5
2,709,158	+		AZOBR_RS12850	0.76	+1.3
2,709,158	+		AZOBR_RS12850	0.76	-0.9
2,709,158	+		AZOBR_RS12850	0.76	+1.9
2,709,158	+		AZOBR_RS12850	0.76	+0.7
2,709,158	+		AZOBR_RS12850	0.76	-4.1
2,709,159	-		AZOBR_RS12850	0.76	-0.2
2,709,159	-		AZOBR_RS12850	0.76	+1.4
2,709,159	-		AZOBR_RS12850	0.76	+0.3
2,709,159	-		AZOBR_RS12850	0.76	-3.2
2,709,159	-		AZOBR_RS12850	0.76	+0.3
2,709,159	-		AZOBR_RS12850	0.76	-0.5
2,709,159	-		AZOBR_RS12850	0.76	+0.3
2,709,159	-		AZOBR_RS12850	0.76	+1.0
2,709,159	-		AZOBR_RS12850	0.76	-0.7
2,709,159	-		AZOBR_RS12850	0.76	+0.5
2,709,227	+		AZOBR_RS12850	0.82	-0.5
2,709,227	+		AZOBR_RS12850	0.82	+0.2
2,709,227	+		AZOBR_RS12850	0.82	-0.1
2,709,227	+		AZOBR_RS12850	0.82	-1.9
2,709,227	+		AZOBR_RS12850	0.82	-0.8
2,709,227	+		AZOBR_RS12850	0.82	-0.1
2,709,227	+		AZOBR_RS12850	0.82	+0.4
2,709,227	+		AZOBR_RS12850	0.82	+0.4
2,709,227	+		AZOBR_RS12850	0.82	+0.4
2,709,228	-		AZOBR_RS12850	0.82	-0.8
2,709,228	-		AZOBR_RS12850	0.82	+1.6
2,709,228	-		AZOBR_RS12850	0.82	+0.7
2,709,228	-		AZOBR_RS12850	0.82	-1.7
2,709,228	-		AZOBR_RS12850	0.82	-0.8
2,709,228	-		AZOBR_RS12850	0.82	-0.1
2,709,228	-		AZOBR_RS12850	0.82	-1.0
2,709,261	-		AZOBR_RS12850	0.85	+0.2
2,709,303	-		AZOBR_RS12850	0.89	-1.2
2,709,401	+				-1.0
2,709,463	+				-3.6
2,709,636	+				-2.1
2,709,636	+				-1.1
2,709,637	-				+0.6
2,709,855	+		AZOBR_RS12855	0.26	+0.6
2,709,855	+		AZOBR_RS12855	0.26	-1.0
2,709,855	+		AZOBR_RS12855	0.26	-1.5
2,709,855	+		AZOBR_RS12855	0.26	+0.4
2,709,855	+		AZOBR_RS12855	0.26	-0.8
2,709,855	+		AZOBR_RS12855	0.26	+0.3
2,709,855	+		AZOBR_RS12855	0.26	-0.4
2,709,856	-		AZOBR_RS12855	0.26	+0.7
2,709,856	-		AZOBR_RS12855	0.26	+0.2
2,709,856	-		AZOBR_RS12855	0.26	-1.7
2,709,856	-		AZOBR_RS12855	0.26	+0.3
2,709,856	-		AZOBR_RS12855	0.26	+0.9
2,710,005	+		AZOBR_RS12855	0.40	+1.1
2,710,005	+		AZOBR_RS12855	0.40	-0.5
2,710,005	+		AZOBR_RS12855	0.40	-1.8
2,710,005	+		AZOBR_RS12855	0.40	+0.3
2,710,006	-		AZOBR_RS12855	0.40	+0.3
2,710,305	+		AZOBR_RS12855	0.67	-3.9
2,710,306	-		AZOBR_RS12855	0.67	+1.1
2,710,467	+		AZOBR_RS12855	0.82	+1.7
2,710,467	+		AZOBR_RS12855	0.82	-1.3
2,710,467	+		AZOBR_RS12855	0.82	-3.1
2,710,467	+		AZOBR_RS12855	0.82	+0.2
2,710,467	+		AZOBR_RS12855	0.82	-1.4
2,710,467	+		AZOBR_RS12855	0.82	-5.0
2,710,467	+		AZOBR_RS12855	0.82	+0.2
2,710,468	-		AZOBR_RS12855	0.82	-0.2
2,710,468	-		AZOBR_RS12855	0.82	-3.2
2,710,468	-		AZOBR_RS12855	0.82	+0.9
2,710,468	-		AZOBR_RS12855	0.82	+0.4
2,710,468	-		AZOBR_RS12855	0.82	+0.2
2,710,468	-		AZOBR_RS12855	0.82	-4.1
2,710,485	+		AZOBR_RS12855	0.84	+0.1
2,710,485	+		AZOBR_RS12855	0.84	-0.1
2,710,486	-		AZOBR_RS12855	0.84	-1.7
2,710,486	-		AZOBR_RS12855	0.84	-0.4
2,710,486	-		AZOBR_RS12855	0.84	+0.6
2,710,555	-				-1.7
2,710,555	-				+0.5
2,710,555	-				-0.3
2,710,555	-				-1.4
2,710,590	+				+2.1
2,710,590	+				+0.4
2,710,590	+				+0.1
2,710,590	+				-1.2
2,710,732	-				+1.3
2,711,341	+		AZOBR_RS12860	0.31	+1.5
2,711,342	-		AZOBR_RS12860	0.31	-5.0
2,711,490	-		AZOBR_RS12860	0.66	-0.4
2,711,531	+		AZOBR_RS12860	0.75	+0.6
2,711,531	+		AZOBR_RS12860	0.75	-1.2
2,711,531	+		AZOBR_RS12860	0.75	-1.7
2,711,532	-		AZOBR_RS12860	0.75	-1.2
2,711,532	-		AZOBR_RS12860	0.75	-1.2
2,711,532	-		AZOBR_RS12860	0.75	-0.1
2,711,532	-		AZOBR_RS12860	0.75	-1.2
2,711,532	-		AZOBR_RS12860	0.75	-3.6
2,711,631	-				-4.1