Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS12845

Experiment: Sisomicin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.01 mg/ml
2,706,706	+		AZOBR_RS12835	0.67	-0.3
2,706,706	+		AZOBR_RS12835	0.67	-0.8
2,706,707	-		AZOBR_RS12835	0.67	-0.9
2,707,238	+		AZOBR_RS12840	0.52	+0.5
2,707,238	+		AZOBR_RS12840	0.52	+1.9
2,707,572	+				+0.4
2,707,573	-				-2.3
2,707,879	+		AZOBR_RS12845	0.39	+1.3
2,707,880	-		AZOBR_RS12845	0.39	-4.1
2,707,934	-		AZOBR_RS12845	0.48	+0.5
2,707,934	-		AZOBR_RS12845	0.48	+2.6
2,708,050	+		AZOBR_RS12845	0.66	-0.3
2,708,050	+		AZOBR_RS12845	0.66	+0.0
2,708,050	+		AZOBR_RS12845	0.66	+0.1
2,708,050	+		AZOBR_RS12845	0.66	+0.6
2,708,050	+		AZOBR_RS12845	0.66	+0.1
2,708,050	+		AZOBR_RS12845	0.66	-1.3
2,708,051	-		AZOBR_RS12845	0.67	-1.0
2,708,101	+		AZOBR_RS12845	0.74	-2.3
2,708,170	+		AZOBR_RS12845	0.85	-1.7
2,708,170	+		AZOBR_RS12845	0.85	-0.6
2,708,170	+		AZOBR_RS12845	0.85	+1.1
2,708,171	-		AZOBR_RS12845	0.85	-1.9
2,708,171	-		AZOBR_RS12845	0.85	-0.1
2,708,171	-		AZOBR_RS12845	0.85	-0.4
2,708,173	+		AZOBR_RS12845	0.86	-0.2
2,708,185	+		AZOBR_RS12845	0.88	+1.9
2,708,185	+		AZOBR_RS12845	0.88	-1.5
2,708,197	+		AZOBR_RS12845	0.90	+1.0
2,708,197	+		AZOBR_RS12845	0.90	-0.7
2,708,197	+		AZOBR_RS12845	0.90	+1.7
2,708,197	+		AZOBR_RS12845	0.90	+0.6
2,708,197	+		AZOBR_RS12845	0.90	-2.0
2,708,198	-		AZOBR_RS12845	0.90	+0.1
2,708,221	+				+0.2
2,708,222	-				+0.1
2,708,324	+				-3.0
2,708,375	-				+0.1
2,708,468	+		AZOBR_RS12850	0.13	-1.5
2,708,468	+		AZOBR_RS12850	0.13	-3.0
2,708,528	+		AZOBR_RS12850	0.19	+0.8
2,708,529	-		AZOBR_RS12850	0.19	+2.2
2,708,675	+		AZOBR_RS12850	0.32	-0.2
2,708,702	+		AZOBR_RS12850	0.34	+0.6
2,708,942	+		AZOBR_RS12850	0.56	-0.8
2,708,942	+		AZOBR_RS12850	0.56	-0.4
2,708,984	+		AZOBR_RS12850	0.60	+0.3
2,708,985	-		AZOBR_RS12850	0.60	-0.6
2,708,985	-		AZOBR_RS12850	0.60	+0.4
2,708,985	-		AZOBR_RS12850	0.60	-1.1
2,708,985	-		AZOBR_RS12850	0.60	-1.4
2,708,985	-		AZOBR_RS12850	0.60	+1.1
2,709,140	+		AZOBR_RS12850	0.74	+1.3
2,709,141	-		AZOBR_RS12850	0.74	-2.5
2,709,158	+		AZOBR_RS12850	0.76	+1.3
2,709,158	+		AZOBR_RS12850	0.76	-0.9
2,709,158	+		AZOBR_RS12850	0.76	+1.9
2,709,158	+		AZOBR_RS12850	0.76	+0.7
2,709,158	+		AZOBR_RS12850	0.76	-4.1
2,709,159	-		AZOBR_RS12850	0.76	-0.2
2,709,159	-		AZOBR_RS12850	0.76	+1.4
2,709,159	-		AZOBR_RS12850	0.76	+0.3
2,709,159	-		AZOBR_RS12850	0.76	-3.2
2,709,159	-		AZOBR_RS12850	0.76	+0.3
2,709,159	-		AZOBR_RS12850	0.76	-0.5
2,709,159	-		AZOBR_RS12850	0.76	+0.3
2,709,159	-		AZOBR_RS12850	0.76	+1.0
2,709,159	-		AZOBR_RS12850	0.76	-0.7
2,709,159	-		AZOBR_RS12850	0.76	+0.5
2,709,227	+		AZOBR_RS12850	0.82	-0.5
2,709,227	+		AZOBR_RS12850	0.82	+0.2
2,709,227	+		AZOBR_RS12850	0.82	-0.1
2,709,227	+		AZOBR_RS12850	0.82	-1.9
2,709,227	+		AZOBR_RS12850	0.82	-0.8
2,709,227	+		AZOBR_RS12850	0.82	-0.1
2,709,227	+		AZOBR_RS12850	0.82	+0.4
2,709,227	+		AZOBR_RS12850	0.82	+0.4
2,709,227	+		AZOBR_RS12850	0.82	+0.4
2,709,228	-		AZOBR_RS12850	0.82	-0.8
2,709,228	-		AZOBR_RS12850	0.82	+1.6
2,709,228	-		AZOBR_RS12850	0.82	+0.7
2,709,228	-		AZOBR_RS12850	0.82	-1.7
2,709,228	-		AZOBR_RS12850	0.82	-0.8
2,709,228	-		AZOBR_RS12850	0.82	-0.1
2,709,228	-		AZOBR_RS12850	0.82	-1.0
2,709,261	-		AZOBR_RS12850	0.85	+0.2