Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS11335
Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,381,301 | + | AZOBR_RS11330 | 0.62 | -0.0 | |
2,381,759 | - | AZOBR_RS11330 | 0.86 | +1.0 | |
2,381,759 | - | AZOBR_RS11330 | 0.86 | -3.0 | |
2,382,144 | - | +1.0 | |||
2,382,207 | + | +1.9 | |||
2,382,289 | - | AZOBR_RS11335 | 0.18 | +0.2 | |
2,382,359 | + | AZOBR_RS11335 | 0.27 | -2.3 | |
2,382,359 | + | AZOBR_RS11335 | 0.27 | +0.9 | |
2,382,360 | - | AZOBR_RS11335 | 0.27 | +0.1 | |
2,382,360 | - | AZOBR_RS11335 | 0.27 | +0.4 | |
2,383,317 | + | AZOBR_RS11340 | 0.28 | +1.7 | |
2,383,495 | - | AZOBR_RS11340 | 0.42 | +0.2 | |
2,383,686 | + | AZOBR_RS11340 | 0.56 | -0.2 | |
2,383,687 | - | AZOBR_RS11340 | 0.56 | +1.6 |
Or see this region's nucleotide sequence