Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS09725
Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,036,491 | - | AZOBR_RS09720 | 0.59 | +0.6 | |
2,036,551 | - | AZOBR_RS09720 | 0.63 | -0.7 | |
2,036,648 | + | AZOBR_RS09720 | 0.69 | -4.9 | |
2,036,898 | + | AZOBR_RS09720 | 0.86 | -1.3 | |
2,036,899 | - | AZOBR_RS09720 | 0.86 | -0.3 | |
2,036,904 | + | AZOBR_RS09720 | 0.86 | -1.8 | |
2,036,904 | + | AZOBR_RS09720 | 0.86 | +0.8 | |
2,036,905 | - | AZOBR_RS09720 | 0.86 | -2.1 | |
2,036,953 | - | AZOBR_RS09720 | 0.90 | -2.2 | |
2,037,200 | - | +0.2 | |||
2,037,200 | - | +1.5 | |||
2,037,409 | + | AZOBR_RS09725 | 0.36 | +0.3 | |
2,037,409 | + | AZOBR_RS09725 | 0.36 | +0.3 | |
2,037,410 | - | AZOBR_RS09725 | 0.36 | +0.7 | |
2,037,410 | - | AZOBR_RS09725 | 0.36 | +0.1 | |
2,037,842 | + | +0.6 | |||
2,037,842 | + | +0.4 | |||
2,037,843 | - | +1.4 |
Or see this region's nucleotide sequence