Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS09680
Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,031,303 | - | -0.2 | |||
2,031,457 | + | +0.6 | |||
2,031,457 | + | -0.1 | |||
2,031,457 | + | +1.3 | |||
2,031,458 | - | -2.1 | |||
2,031,458 | - | +2.7 | |||
2,031,458 | - | +0.7 | |||
2,031,458 | - | -0.5 | |||
2,031,489 | + | +0.8 | |||
2,031,490 | - | -2.3 | |||
2,031,490 | - | -0.7 | |||
2,031,490 | - | -0.9 | |||
2,031,542 | + | +0.4 | |||
2,031,554 | + | +0.3 | |||
2,031,842 | - | AZOBR_RS09685 | 0.37 | -1.3 | |
2,031,854 | - | AZOBR_RS09685 | 0.38 | -0.5 | |
2,032,132 | - | AZOBR_RS09685 | 0.79 | +0.5 | |
2,032,174 | + | AZOBR_RS09685 | 0.85 | -4.1 | |
2,032,174 | + | AZOBR_RS09685 | 0.85 | +0.4 | |
2,032,174 | + | AZOBR_RS09685 | 0.85 | -0.1 | |
2,032,175 | - | AZOBR_RS09685 | 0.86 | -0.6 | |
2,032,175 | - | AZOBR_RS09685 | 0.86 | +0.2 | |
2,032,175 | - | AZOBR_RS09685 | 0.86 | -4.8 | |
2,032,175 | - | AZOBR_RS09685 | 0.86 | -2.6 | |
2,032,175 | - | AZOBR_RS09685 | 0.86 | -1.1 | |
2,032,176 | - | AZOBR_RS09685 | 0.86 | +0.4 |
Or see this region's nucleotide sequence