Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS09430
Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,970,461 | + | -0.7 | |||
1,970,461 | + | -2.6 | |||
1,970,617 | + | +0.3 | |||
1,970,617 | + | +1.4 | |||
1,970,618 | - | +1.2 | |||
1,970,672 | - | -0.1 | |||
1,970,998 | + | +1.3 | |||
1,971,100 | + | +1.0 | |||
1,971,292 | + | -2.8 | |||
1,971,293 | - | -1.8 | |||
1,971,301 | + | -0.1 | |||
1,971,301 | + | -1.2 | |||
1,971,447 | - | -0.4 | |||
1,971,447 | - | +0.9 | |||
1,971,473 | + | +1.0 | |||
1,971,473 | + | -2.0 | |||
1,971,546 | - | AZOBR_RS09430 | 0.12 | -1.0 | |
1,971,546 | - | AZOBR_RS09430 | 0.12 | +1.3 | |
1,971,839 | + | AZOBR_RS09430 | 0.48 | -2.5 | |
1,972,169 | + | AZOBR_RS09430 | 0.90 | +0.5 | |
1,972,256 | - | -0.0 | |||
1,972,256 | - | +0.4 | |||
1,972,256 | - | +0.7 | |||
1,972,256 | - | +0.6 | |||
1,972,400 | - | AZOBR_RS09435 | 0.20 | +0.4 | |
1,972,474 | + | AZOBR_RS09435 | 0.30 | -1.2 | |
1,972,475 | - | AZOBR_RS09435 | 0.30 | -2.0 | |
1,972,936 | + | AZOBR_RS09435 | 0.89 | -0.2 | |
1,972,936 | + | AZOBR_RS09435 | 0.89 | -0.1 | |
1,973,058 | + | -0.1 |
Or see this region's nucleotide sequence