Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07855 and AZOBR_RS07860 are separated by 167 nucleotides
AZOBR_RS07855: AZOBR_RS07855 - hypothetical protein, at 1,655,378 to 1,656,382
_RS07855
AZOBR_RS07860: AZOBR_RS07860 - hypothetical protein, at 1,656,550 to 1,656,921
_RS07860
Position (kb)
1656
1657 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1655.589 kb on + strand, within AZOBR_RS07855 at 1655.589 kb on + strand, within AZOBR_RS07855 at 1655.590 kb on - strand, within AZOBR_RS07855 at 1655.678 kb on + strand, within AZOBR_RS07855 at 1655.678 kb on + strand, within AZOBR_RS07855 at 1655.679 kb on - strand, within AZOBR_RS07855 at 1655.679 kb on - strand, within AZOBR_RS07855 at 1655.679 kb on - strand, within AZOBR_RS07855 at 1655.679 kb on - strand, within AZOBR_RS07855 at 1655.933 kb on + strand, within AZOBR_RS07855 at 1655.933 kb on + strand, within AZOBR_RS07855 at 1655.934 kb on - strand, within AZOBR_RS07855 at 1655.934 kb on - strand, within AZOBR_RS07855 at 1655.976 kb on + strand, within AZOBR_RS07855 at 1655.977 kb on - strand, within AZOBR_RS07855 at 1656.137 kb on + strand, within AZOBR_RS07855 at 1656.137 kb on + strand, within AZOBR_RS07855 at 1656.138 kb on - strand, within AZOBR_RS07855 at 1656.138 kb on - strand, within AZOBR_RS07855 at 1656.318 kb on + strand at 1656.318 kb on + strand at 1656.318 kb on + strand at 1656.318 kb on + strand at 1656.318 kb on + strand at 1656.318 kb on + strand at 1656.319 kb on - strand at 1656.319 kb on - strand at 1656.319 kb on - strand at 1656.380 kb on + strand at 1656.380 kb on + strand at 1656.437 kb on - strand at 1656.513 kb on + strand at 1656.572 kb on + strand at 1656.930 kb on + strand at 1656.931 kb on - strand at 1656.963 kb on + strand at 1656.964 kb on - strand at 1657.218 kb on + strand at 1657.218 kb on + strand at 1657.218 kb on + strand at 1657.219 kb on - strand at 1657.219 kb on - strand at 1657.336 kb on + strand at 1657.511 kb on + strand at 1657.512 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 1,655,589 + AZOBR_RS07855 0.21 -0.8 1,655,589 + AZOBR_RS07855 0.21 -0.3 1,655,590 - AZOBR_RS07855 0.21 +2.7 1,655,678 + AZOBR_RS07855 0.30 +0.2 1,655,678 + AZOBR_RS07855 0.30 +0.9 1,655,679 - AZOBR_RS07855 0.30 +0.2 1,655,679 - AZOBR_RS07855 0.30 +0.2 1,655,679 - AZOBR_RS07855 0.30 +0.6 1,655,679 - AZOBR_RS07855 0.30 +1.8 1,655,933 + AZOBR_RS07855 0.55 -0.2 1,655,933 + AZOBR_RS07855 0.55 +0.1 1,655,934 - AZOBR_RS07855 0.55 -3.1 1,655,934 - AZOBR_RS07855 0.55 +0.1 1,655,976 + AZOBR_RS07855 0.60 +0.5 1,655,977 - AZOBR_RS07855 0.60 +0.3 1,656,137 + AZOBR_RS07855 0.76 +1.0 1,656,137 + AZOBR_RS07855 0.76 -0.5 1,656,138 - AZOBR_RS07855 0.76 +1.6 1,656,138 - AZOBR_RS07855 0.76 +0.7 1,656,318 + +0.2 1,656,318 + +0.7 1,656,318 + -1.2 1,656,318 + -2.6 1,656,318 + -0.6 1,656,318 + +0.8 1,656,319 - -1.6 1,656,319 - +0.7 1,656,319 - -1.2 1,656,380 + -1.2 1,656,380 + -2.8 1,656,437 - -0.1 1,656,513 + -0.0 1,656,572 + -2.9 1,656,930 + -0.9 1,656,931 - -2.7 1,656,963 + -1.4 1,656,964 - +0.7 1,657,218 + -1.0 1,657,218 + +0.6 1,657,218 + +0.1 1,657,219 - -2.0 1,657,219 - -2.4 1,657,336 + -1.1 1,657,511 + +0.7 1,657,512 - -0.1
Or see this region's nucleotide sequence