Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06200 and AZOBR_RS06205 are separated by 185 nucleotides AZOBR_RS06205 and AZOBR_RS06210 are separated by 172 nucleotides AZOBR_RS06210 and AZOBR_RS06215 are separated by 144 nucleotides AZOBR_RS06215 and AZOBR_RS06220 are separated by 308 nucleotides
AZOBR_RS06200: AZOBR_RS06200 - NAD(P)H quinone oxidoreductase, at 1,313,434 to 1,314,441
_RS06200
AZOBR_RS06205: AZOBR_RS06205 - hypothetical protein, at 1,314,627 to 1,314,815
_RS06205
AZOBR_RS06210: AZOBR_RS06210 - membrane protein, at 1,314,988 to 1,315,827
_RS06210
AZOBR_RS06215: AZOBR_RS06215 - hypothetical protein, at 1,315,972 to 1,316,178
_RS06215
AZOBR_RS06220: AZOBR_RS06220 - hypothetical protein, at 1,316,487 to 1,316,714
_RS06220
Position (kb)
1314
1315
1316 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1314.128 kb on + strand, within AZOBR_RS06200 at 1314.711 kb on + strand at 1314.712 kb on - strand, within AZOBR_RS06205 at 1314.912 kb on + strand at 1314.912 kb on + strand at 1314.912 kb on + strand at 1314.912 kb on + strand at 1314.912 kb on + strand at 1314.913 kb on - strand at 1314.913 kb on - strand at 1314.913 kb on - strand at 1314.913 kb on - strand at 1314.913 kb on - strand at 1315.571 kb on + strand, within AZOBR_RS06210 at 1315.571 kb on + strand, within AZOBR_RS06210 at 1315.571 kb on + strand, within AZOBR_RS06210 at 1315.572 kb on - strand, within AZOBR_RS06210 at 1315.637 kb on + strand, within AZOBR_RS06210 at 1315.736 kb on + strand, within AZOBR_RS06210 at 1315.736 kb on + strand, within AZOBR_RS06210 at 1315.736 kb on + strand, within AZOBR_RS06210 at 1315.737 kb on - strand, within AZOBR_RS06210 at 1315.876 kb on + strand at 1315.877 kb on - strand at 1316.205 kb on + strand at 1316.488 kb on + strand at 1316.488 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 1,314,128 + AZOBR_RS06200 0.69 -0.6 1,314,711 + -0.6 1,314,712 - AZOBR_RS06205 0.45 -0.2 1,314,912 + -0.6 1,314,912 + -3.0 1,314,912 + -0.5 1,314,912 + +1.3 1,314,912 + +0.1 1,314,913 - -1.4 1,314,913 - +0.9 1,314,913 - -1.1 1,314,913 - +1.2 1,314,913 - +0.6 1,315,571 + AZOBR_RS06210 0.69 +0.7 1,315,571 + AZOBR_RS06210 0.69 +0.3 1,315,571 + AZOBR_RS06210 0.69 -4.3 1,315,572 - AZOBR_RS06210 0.70 +1.3 1,315,637 + AZOBR_RS06210 0.77 -1.4 1,315,736 + AZOBR_RS06210 0.89 +0.8 1,315,736 + AZOBR_RS06210 0.89 +0.4 1,315,736 + AZOBR_RS06210 0.89 -3.5 1,315,737 - AZOBR_RS06210 0.89 -0.8 1,315,876 + -1.0 1,315,877 - -0.1 1,316,205 + +0.7 1,316,488 + -0.5 1,316,488 + +0.3
Or see this region's nucleotide sequence