Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS06160
Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,304,983 | + | AZOBR_RS06155 | 0.15 | -1.6 | |
1,304,983 | + | AZOBR_RS06155 | 0.15 | -4.4 | |
1,305,595 | + | AZOBR_RS06155 | 0.71 | +1.3 | |
1,305,613 | + | AZOBR_RS06155 | 0.73 | -3.4 | |
1,305,614 | - | AZOBR_RS06155 | 0.73 | +1.8 | |
1,305,835 | + | +0.3 | |||
1,305,835 | + | +1.7 | |||
1,305,835 | + | -1.1 | |||
1,305,836 | - | -1.4 | |||
1,305,836 | - | -1.9 | |||
1,305,990 | - | -0.4 | |||
1,306,214 | + | AZOBR_RS06160 | 0.58 | +1.2 | |
1,306,214 | + | AZOBR_RS06160 | 0.58 | +1.0 | |
1,306,214 | + | AZOBR_RS06160 | 0.58 | +1.5 | |
1,306,706 | - | AZOBR_RS06165 | 0.48 | +1.1 | |
1,306,706 | - | AZOBR_RS06165 | 0.48 | +0.5 | |
1,306,940 | + | AZOBR_RS06165 | 0.88 | -0.7 | |
1,306,941 | - | AZOBR_RS06165 | 0.88 | +0.3 | |
1,307,060 | - | AZOBR_RS06170 | 0.17 | -1.1 | |
1,307,061 | - | AZOBR_RS06170 | 0.17 | +0.2 | |
1,307,061 | - | AZOBR_RS06170 | 0.17 | -2.4 | |
1,307,061 | - | AZOBR_RS06170 | 0.17 | +0.6 | |
1,307,167 | + | AZOBR_RS06170 | 0.44 | +0.1 |
Or see this region's nucleotide sequence