Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03360 and AZOBR_RS03365 overlap by 4 nucleotides AZOBR_RS03365 and AZOBR_RS03370 are separated by 6 nucleotides
AZOBR_RS03360: AZOBR_RS03360 - glycosyl transferase family 1, at 711,791 to 712,921
_RS03360
AZOBR_RS03365: AZOBR_RS03365 - glycosyl transferase, at 712,918 to 714,189
_RS03365
AZOBR_RS03370: AZOBR_RS03370 - GDP-L-fucose synthase, at 714,196 to 715,176
_RS03370
Position (kb) 712
713
714
715 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 712.266 kb on + strand, within AZOBR_RS03360 at 712.407 kb on + strand, within AZOBR_RS03360 at 712.452 kb on + strand, within AZOBR_RS03360 at 712.492 kb on - strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.501 kb on - strand, within AZOBR_RS03360 at 712.501 kb on - strand, within AZOBR_RS03360 at 712.501 kb on - strand, within AZOBR_RS03360 at 712.501 kb on - strand, within AZOBR_RS03360 at 712.633 kb on - strand, within AZOBR_RS03360 at 712.692 kb on + strand, within AZOBR_RS03360 at 712.785 kb on + strand, within AZOBR_RS03360 at 712.785 kb on + strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.827 kb on + strand at 712.827 kb on + strand at 712.827 kb on + strand at 712.827 kb on + strand at 712.827 kb on + strand at 712.828 kb on - strand at 712.876 kb on - strand at 713.463 kb on - strand, within AZOBR_RS03365 at 713.972 kb on + strand, within AZOBR_RS03365 at 713.972 kb on + strand, within AZOBR_RS03365 at 713.972 kb on + strand, within AZOBR_RS03365 at 713.973 kb on - strand, within AZOBR_RS03365 at 713.973 kb on - strand, within AZOBR_RS03365 at 713.973 kb on - strand, within AZOBR_RS03365 at 714.092 kb on + strand at 714.092 kb on + strand at 714.092 kb on + strand at 714.092 kb on + strand at 714.093 kb on - strand at 714.275 kb on + strand at 714.276 kb on - strand at 714.405 kb on - strand, within AZOBR_RS03370 at 714.491 kb on + strand, within AZOBR_RS03370 at 714.491 kb on + strand, within AZOBR_RS03370 at 714.492 kb on - strand, within AZOBR_RS03370 at 714.492 kb on - strand, within AZOBR_RS03370 at 714.537 kb on - strand, within AZOBR_RS03370 at 714.674 kb on + strand, within AZOBR_RS03370 at 714.674 kb on + strand, within AZOBR_RS03370 at 714.767 kb on + strand, within AZOBR_RS03370 at 714.768 kb on - strand, within AZOBR_RS03370 at 715.001 kb on + strand, within AZOBR_RS03370 at 715.001 kb on + strand, within AZOBR_RS03370 at 715.002 kb on - strand, within AZOBR_RS03370 at 715.002 kb on - strand, within AZOBR_RS03370
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 712,266 + AZOBR_RS03360 0.42 +1.1 712,407 + AZOBR_RS03360 0.54 +1.1 712,452 + AZOBR_RS03360 0.58 +3.6 712,492 - AZOBR_RS03360 0.62 -3.1 712,500 + AZOBR_RS03360 0.63 -1.3 712,500 + AZOBR_RS03360 0.63 +0.3 712,500 + AZOBR_RS03360 0.63 -4.0 712,500 + AZOBR_RS03360 0.63 -2.1 712,500 + AZOBR_RS03360 0.63 +1.4 712,501 - AZOBR_RS03360 0.63 -0.4 712,501 - AZOBR_RS03360 0.63 +0.2 712,501 - AZOBR_RS03360 0.63 -1.2 712,501 - AZOBR_RS03360 0.63 +0.2 712,633 - AZOBR_RS03360 0.74 +1.8 712,692 + AZOBR_RS03360 0.80 +0.1 712,785 + AZOBR_RS03360 0.88 -0.0 712,785 + AZOBR_RS03360 0.88 -3.2 712,786 - AZOBR_RS03360 0.88 -0.4 712,786 - AZOBR_RS03360 0.88 +0.5 712,786 - AZOBR_RS03360 0.88 -0.1 712,786 - AZOBR_RS03360 0.88 +0.6 712,786 - AZOBR_RS03360 0.88 +0.1 712,786 - AZOBR_RS03360 0.88 -5.0 712,827 + -0.6 712,827 + +0.2 712,827 + -4.2 712,827 + +0.6 712,827 + -0.1 712,828 - -0.2 712,876 - -0.9 713,463 - AZOBR_RS03365 0.43 -3.9 713,972 + AZOBR_RS03365 0.83 +0.4 713,972 + AZOBR_RS03365 0.83 -2.0 713,972 + AZOBR_RS03365 0.83 +0.3 713,973 - AZOBR_RS03365 0.83 +0.5 713,973 - AZOBR_RS03365 0.83 -1.0 713,973 - AZOBR_RS03365 0.83 +0.5 714,092 + +0.8 714,092 + +0.5 714,092 + -0.8 714,092 + -0.5 714,093 - -2.4 714,275 + +1.2 714,276 - +0.2 714,405 - AZOBR_RS03370 0.21 -0.1 714,491 + AZOBR_RS03370 0.30 -0.1 714,491 + AZOBR_RS03370 0.30 -0.3 714,492 - AZOBR_RS03370 0.30 +1.5 714,492 - AZOBR_RS03370 0.30 -0.2 714,537 - AZOBR_RS03370 0.35 -0.5 714,674 + AZOBR_RS03370 0.49 +0.7 714,674 + AZOBR_RS03370 0.49 -0.4 714,767 + AZOBR_RS03370 0.58 +0.6 714,768 - AZOBR_RS03370 0.58 -0.4 715,001 + AZOBR_RS03370 0.82 +0.3 715,001 + AZOBR_RS03370 0.82 +0.6 715,002 - AZOBR_RS03370 0.82 +0.5 715,002 - AZOBR_RS03370 0.82 -1.3
Or see this region's nucleotide sequence