Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03360 and AZOBR_RS03365 overlap by 4 nucleotides
AZOBR_RS03360: AZOBR_RS03360 - glycosyl transferase family 1, at 711,791 to 712,921
_RS03360
AZOBR_RS03365: AZOBR_RS03365 - glycosyl transferase, at 712,918 to 714,189
_RS03365
Position (kb) 711
712
713 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 710.827 kb on - strand at 710.827 kb on - strand at 710.928 kb on + strand at 710.929 kb on - strand at 710.929 kb on - strand at 710.968 kb on - strand at 711.238 kb on - strand at 711.417 kb on + strand at 711.417 kb on + strand at 711.418 kb on - strand at 711.418 kb on - strand at 711.450 kb on + strand at 711.450 kb on + strand at 711.450 kb on + strand at 711.451 kb on - strand at 711.532 kb on - strand at 711.532 kb on - strand at 712.266 kb on + strand, within AZOBR_RS03360 at 712.407 kb on + strand, within AZOBR_RS03360 at 712.452 kb on + strand, within AZOBR_RS03360 at 712.492 kb on - strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.500 kb on + strand, within AZOBR_RS03360 at 712.501 kb on - strand, within AZOBR_RS03360 at 712.501 kb on - strand, within AZOBR_RS03360 at 712.501 kb on - strand, within AZOBR_RS03360 at 712.501 kb on - strand, within AZOBR_RS03360 at 712.633 kb on - strand, within AZOBR_RS03360 at 712.692 kb on + strand, within AZOBR_RS03360 at 712.785 kb on + strand, within AZOBR_RS03360 at 712.785 kb on + strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.786 kb on - strand, within AZOBR_RS03360 at 712.827 kb on + strand at 712.827 kb on + strand at 712.827 kb on + strand at 712.827 kb on + strand at 712.827 kb on + strand at 712.828 kb on - strand at 712.876 kb on - strand at 713.463 kb on - strand, within AZOBR_RS03365
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 710,827 - -1.7 710,827 - -1.2 710,928 + +0.9 710,929 - -0.7 710,929 - -1.1 710,968 - -3.4 711,238 - +0.1 711,417 + +0.2 711,417 + +0.2 711,418 - -1.1 711,418 - +0.5 711,450 + -4.2 711,450 + -0.1 711,450 + +0.4 711,451 - +1.6 711,532 - -0.0 711,532 - +2.1 712,266 + AZOBR_RS03360 0.42 +1.1 712,407 + AZOBR_RS03360 0.54 +1.1 712,452 + AZOBR_RS03360 0.58 +3.6 712,492 - AZOBR_RS03360 0.62 -3.1 712,500 + AZOBR_RS03360 0.63 -1.3 712,500 + AZOBR_RS03360 0.63 +0.3 712,500 + AZOBR_RS03360 0.63 -4.0 712,500 + AZOBR_RS03360 0.63 -2.1 712,500 + AZOBR_RS03360 0.63 +1.4 712,501 - AZOBR_RS03360 0.63 -0.4 712,501 - AZOBR_RS03360 0.63 +0.2 712,501 - AZOBR_RS03360 0.63 -1.2 712,501 - AZOBR_RS03360 0.63 +0.2 712,633 - AZOBR_RS03360 0.74 +1.8 712,692 + AZOBR_RS03360 0.80 +0.1 712,785 + AZOBR_RS03360 0.88 -0.0 712,785 + AZOBR_RS03360 0.88 -3.2 712,786 - AZOBR_RS03360 0.88 -0.4 712,786 - AZOBR_RS03360 0.88 +0.5 712,786 - AZOBR_RS03360 0.88 -0.1 712,786 - AZOBR_RS03360 0.88 +0.6 712,786 - AZOBR_RS03360 0.88 +0.1 712,786 - AZOBR_RS03360 0.88 -5.0 712,827 + -0.6 712,827 + +0.2 712,827 + -4.2 712,827 + +0.6 712,827 + -0.1 712,828 - -0.2 712,876 - -0.9 713,463 - AZOBR_RS03365 0.43 -3.9
Or see this region's nucleotide sequence