Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03310 and AZOBR_RS03315 are separated by 5 nucleotides AZOBR_RS03315 and AZOBR_RS03320 are separated by 230 nucleotides AZOBR_RS03320 and AZOBR_RS03325 are separated by 99 nucleotides
AZOBR_RS03310: AZOBR_RS03310 - ribonuclease P, at 700,840 to 701,211
_RS03310
AZOBR_RS03315: AZOBR_RS03315 - 50S ribosomal protein L34, at 701,217 to 701,351
_RS03315
AZOBR_RS03320: AZOBR_RS03320 - hypothetical protein, at 701,582 to 703,084
_RS03320
AZOBR_RS03325: AZOBR_RS03325 - hypothetical protein, at 703,184 to 704,041
_RS03325
Position (kb) 701
702
703
704 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 700.607 kb on - strand at 701.904 kb on - strand, within AZOBR_RS03320 at 702.021 kb on - strand, within AZOBR_RS03320 at 702.170 kb on + strand, within AZOBR_RS03320 at 702.279 kb on - strand, within AZOBR_RS03320 at 702.590 kb on + strand, within AZOBR_RS03320 at 702.590 kb on + strand, within AZOBR_RS03320 at 702.590 kb on - strand, within AZOBR_RS03320 at 702.591 kb on - strand, within AZOBR_RS03320 at 702.591 kb on - strand, within AZOBR_RS03320 at 702.591 kb on - strand, within AZOBR_RS03320 at 702.674 kb on + strand, within AZOBR_RS03320 at 702.675 kb on - strand, within AZOBR_RS03320 at 702.675 kb on - strand, within AZOBR_RS03320 at 702.779 kb on + strand, within AZOBR_RS03320 at 702.779 kb on + strand, within AZOBR_RS03320 at 703.425 kb on + strand, within AZOBR_RS03325 at 703.426 kb on - strand, within AZOBR_RS03325 at 703.426 kb on - strand, within AZOBR_RS03325 at 703.474 kb on - strand, within AZOBR_RS03325 at 703.474 kb on - strand, within AZOBR_RS03325 at 703.474 kb on - strand, within AZOBR_RS03325 at 703.572 kb on + strand, within AZOBR_RS03325 at 703.572 kb on + strand, within AZOBR_RS03325 at 703.572 kb on + strand, within AZOBR_RS03325 at 703.573 kb on - strand, within AZOBR_RS03325 at 703.573 kb on - strand, within AZOBR_RS03325 at 703.573 kb on - strand, within AZOBR_RS03325 at 703.573 kb on - strand, within AZOBR_RS03325 at 703.627 kb on - strand, within AZOBR_RS03325 at 703.627 kb on - strand, within AZOBR_RS03325 at 703.731 kb on + strand, within AZOBR_RS03325 at 703.731 kb on + strand, within AZOBR_RS03325 at 703.731 kb on + strand, within AZOBR_RS03325 at 703.731 kb on + strand, within AZOBR_RS03325 at 703.731 kb on + strand, within AZOBR_RS03325 at 703.731 kb on + strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.797 kb on + strand, within AZOBR_RS03325 at 703.797 kb on + strand, within AZOBR_RS03325 at 703.797 kb on + strand, within AZOBR_RS03325 at 703.798 kb on - strand, within AZOBR_RS03325 at 703.798 kb on - strand, within AZOBR_RS03325 at 703.836 kb on + strand, within AZOBR_RS03325 at 703.837 kb on - strand, within AZOBR_RS03325 at 703.869 kb on + strand, within AZOBR_RS03325
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 700,607 - -3.5 701,904 - AZOBR_RS03320 0.21 -2.6 702,021 - AZOBR_RS03320 0.29 -4.3 702,170 + AZOBR_RS03320 0.39 -1.6 702,279 - AZOBR_RS03320 0.46 -0.6 702,590 + AZOBR_RS03320 0.67 +0.7 702,590 + AZOBR_RS03320 0.67 -0.7 702,590 - AZOBR_RS03320 0.67 +1.2 702,591 - AZOBR_RS03320 0.67 -0.4 702,591 - AZOBR_RS03320 0.67 -0.1 702,591 - AZOBR_RS03320 0.67 +0.3 702,674 + AZOBR_RS03320 0.73 +0.3 702,675 - AZOBR_RS03320 0.73 -1.7 702,675 - AZOBR_RS03320 0.73 +0.4 702,779 + AZOBR_RS03320 0.80 -1.7 702,779 + AZOBR_RS03320 0.80 +1.1 703,425 + AZOBR_RS03325 0.28 +0.1 703,426 - AZOBR_RS03325 0.28 -1.2 703,426 - AZOBR_RS03325 0.28 +0.0 703,474 - AZOBR_RS03325 0.34 -0.8 703,474 - AZOBR_RS03325 0.34 -3.2 703,474 - AZOBR_RS03325 0.34 -0.5 703,572 + AZOBR_RS03325 0.45 -0.9 703,572 + AZOBR_RS03325 0.45 -1.4 703,572 + AZOBR_RS03325 0.45 +0.9 703,573 - AZOBR_RS03325 0.45 +0.7 703,573 - AZOBR_RS03325 0.45 +0.3 703,573 - AZOBR_RS03325 0.45 -0.1 703,573 - AZOBR_RS03325 0.45 -0.4 703,627 - AZOBR_RS03325 0.52 -2.8 703,627 - AZOBR_RS03325 0.52 -1.0 703,731 + AZOBR_RS03325 0.64 +0.4 703,731 + AZOBR_RS03325 0.64 -0.4 703,731 + AZOBR_RS03325 0.64 +0.3 703,731 + AZOBR_RS03325 0.64 +1.1 703,731 + AZOBR_RS03325 0.64 +0.1 703,731 + AZOBR_RS03325 0.64 +0.6 703,732 - AZOBR_RS03325 0.64 +0.5 703,732 - AZOBR_RS03325 0.64 -1.4 703,732 - AZOBR_RS03325 0.64 -0.4 703,732 - AZOBR_RS03325 0.64 -0.1 703,732 - AZOBR_RS03325 0.64 -0.2 703,732 - AZOBR_RS03325 0.64 -0.3 703,732 - AZOBR_RS03325 0.64 +0.8 703,732 - AZOBR_RS03325 0.64 -1.9 703,797 + AZOBR_RS03325 0.71 -0.2 703,797 + AZOBR_RS03325 0.71 -4.2 703,797 + AZOBR_RS03325 0.71 -2.3 703,798 - AZOBR_RS03325 0.72 -0.3 703,798 - AZOBR_RS03325 0.72 +0.8 703,836 + AZOBR_RS03325 0.76 -0.4 703,837 - AZOBR_RS03325 0.76 +0.7 703,869 + AZOBR_RS03325 0.80 -1.7
Or see this region's nucleotide sequence