Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02485 and AZOBR_RS02490 are separated by 139 nucleotides AZOBR_RS02490 and AZOBR_RS02495 are separated by 294 nucleotides
AZOBR_RS02485: AZOBR_RS02485 - muraminidase, at 518,701 to 519,192
_RS02485
AZOBR_RS02490: AZOBR_RS02490 - conserved protein of unknown function (Usg-like), at 519,332 to 519,595
_RS02490
AZOBR_RS02495: AZOBR_RS02495 - molecular chaperone GroES, at 519,890 to 520,180
_RS02495
Position (kb) 518
519
520 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 518.001 kb on - strand at 518.001 kb on - strand at 518.001 kb on - strand at 518.012 kb on + strand at 518.033 kb on + strand at 518.034 kb on - strand at 518.565 kb on - strand at 518.636 kb on + strand at 518.636 kb on + strand at 518.636 kb on + strand at 518.636 kb on + strand at 518.636 kb on + strand at 518.637 kb on - strand at 518.637 kb on - strand at 518.637 kb on - strand at 518.637 kb on - strand at 518.637 kb on - strand at 518.831 kb on + strand, within AZOBR_RS02485 at 518.867 kb on + strand, within AZOBR_RS02485 at 518.867 kb on + strand, within AZOBR_RS02485 at 519.025 kb on + strand, within AZOBR_RS02485 at 519.122 kb on + strand, within AZOBR_RS02485 at 519.122 kb on + strand, within AZOBR_RS02485 at 519.122 kb on + strand, within AZOBR_RS02485 at 519.123 kb on - strand, within AZOBR_RS02485 at 519.123 kb on - strand, within AZOBR_RS02485 at 519.134 kb on + strand, within AZOBR_RS02485 at 519.135 kb on - strand, within AZOBR_RS02485 at 519.501 kb on + strand, within AZOBR_RS02490 at 519.501 kb on + strand, within AZOBR_RS02490 at 519.502 kb on - strand, within AZOBR_RS02490
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 518,001 - -1.5 518,001 - +0.3 518,001 - -0.5 518,012 + +0.5 518,033 + +1.1 518,034 - +1.1 518,565 - +0.1 518,636 + -2.7 518,636 + -0.6 518,636 + +0.2 518,636 + -1.0 518,636 + -0.6 518,637 - +0.1 518,637 - -0.2 518,637 - +0.1 518,637 - +0.1 518,637 - -0.7 518,831 + AZOBR_RS02485 0.26 +0.7 518,867 + AZOBR_RS02485 0.34 +0.5 518,867 + AZOBR_RS02485 0.34 +0.1 519,025 + AZOBR_RS02485 0.66 +1.3 519,122 + AZOBR_RS02485 0.86 +0.3 519,122 + AZOBR_RS02485 0.86 -0.3 519,122 + AZOBR_RS02485 0.86 -1.7 519,123 - AZOBR_RS02485 0.86 +2.1 519,123 - AZOBR_RS02485 0.86 -2.0 519,134 + AZOBR_RS02485 0.88 +1.4 519,135 - AZOBR_RS02485 0.88 +0.7 519,501 + AZOBR_RS02490 0.64 +0.7 519,501 + AZOBR_RS02490 0.64 -0.6 519,502 - AZOBR_RS02490 0.64 -3.3
Or see this region's nucleotide sequence