Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02455 and AZOBR_RS02460 are separated by 399 nucleotides AZOBR_RS02460 and AZOBR_RS02465 are separated by 221 nucleotides
AZOBR_RS02455: AZOBR_RS02455 - conserved membrane protein of unknown function, at 507,990 to 508,700
_RS02455
AZOBR_RS02460: AZOBR_RS02460 - phospholipase, at 509,100 to 511,259
_RS02460
AZOBR_RS02465: AZOBR_RS02465 - endonuclease, at 511,481 to 512,191
_RS02465
Position (kb) 509
510
511
512 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 508.956 kb on + strand at 508.957 kb on + strand at 508.957 kb on + strand at 508.957 kb on + strand at 508.957 kb on + strand at 508.957 kb on + strand at 508.958 kb on - strand at 508.958 kb on - strand at 508.958 kb on - strand at 508.958 kb on - strand at 508.958 kb on - strand at 509.175 kb on + strand at 509.223 kb on + strand at 509.223 kb on + strand at 509.223 kb on + strand at 509.223 kb on + strand at 509.223 kb on + strand at 509.224 kb on - strand at 509.224 kb on - strand at 509.224 kb on - strand at 509.224 kb on - strand at 509.613 kb on + strand, within AZOBR_RS02460 at 509.896 kb on - strand, within AZOBR_RS02460 at 509.970 kb on + strand, within AZOBR_RS02460 at 509.970 kb on + strand, within AZOBR_RS02460 at 509.971 kb on - strand, within AZOBR_RS02460 at 509.985 kb on + strand, within AZOBR_RS02460 at 510.171 kb on + strand, within AZOBR_RS02460 at 510.171 kb on + strand, within AZOBR_RS02460 at 510.171 kb on + strand, within AZOBR_RS02460 at 510.221 kb on + strand, within AZOBR_RS02460 at 510.221 kb on + strand, within AZOBR_RS02460 at 510.221 kb on + strand, within AZOBR_RS02460 at 510.222 kb on - strand, within AZOBR_RS02460 at 510.222 kb on - strand, within AZOBR_RS02460 at 510.828 kb on + strand, within AZOBR_RS02460 at 510.828 kb on + strand, within AZOBR_RS02460 at 510.828 kb on + strand, within AZOBR_RS02460 at 510.829 kb on - strand, within AZOBR_RS02460 at 510.829 kb on - strand, within AZOBR_RS02460 at 510.829 kb on - strand, within AZOBR_RS02460 at 511.140 kb on + strand at 511.141 kb on - strand at 511.141 kb on - strand at 512.084 kb on + strand, within AZOBR_RS02465 at 512.114 kb on + strand, within AZOBR_RS02465 at 512.115 kb on - strand, within AZOBR_RS02465
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 508,956 + +2.1 508,957 + +0.4 508,957 + -2.2 508,957 + -1.0 508,957 + +0.8 508,957 + -0.4 508,958 - +0.8 508,958 - +1.6 508,958 - +0.1 508,958 - -0.1 508,958 - -2.2 509,175 + -3.6 509,223 + +0.4 509,223 + -3.0 509,223 + +0.7 509,223 + +0.4 509,223 + -0.2 509,224 - -1.3 509,224 - -0.5 509,224 - +0.1 509,224 - +0.4 509,613 + AZOBR_RS02460 0.24 +0.5 509,896 - AZOBR_RS02460 0.37 -0.9 509,970 + AZOBR_RS02460 0.40 +0.6 509,970 + AZOBR_RS02460 0.40 +0.6 509,971 - AZOBR_RS02460 0.40 -2.7 509,985 + AZOBR_RS02460 0.41 -0.2 510,171 + AZOBR_RS02460 0.50 -0.5 510,171 + AZOBR_RS02460 0.50 -2.2 510,171 + AZOBR_RS02460 0.50 +0.0 510,221 + AZOBR_RS02460 0.52 -1.9 510,221 + AZOBR_RS02460 0.52 +0.5 510,221 + AZOBR_RS02460 0.52 -3.1 510,222 - AZOBR_RS02460 0.52 -3.4 510,222 - AZOBR_RS02460 0.52 -3.0 510,828 + AZOBR_RS02460 0.80 -1.2 510,828 + AZOBR_RS02460 0.80 +1.1 510,828 + AZOBR_RS02460 0.80 -3.1 510,829 - AZOBR_RS02460 0.80 +0.3 510,829 - AZOBR_RS02460 0.80 +1.7 510,829 - AZOBR_RS02460 0.80 +1.0 511,140 + -0.1 511,141 - +2.7 511,141 - +1.0 512,084 + AZOBR_RS02465 0.85 -0.6 512,114 + AZOBR_RS02465 0.89 +0.3 512,115 - AZOBR_RS02465 0.89 -0.5
Or see this region's nucleotide sequence