Experiment: Sisomicin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01585 and AZOBR_RS01590 are separated by 158 nucleotides AZOBR_RS01590 and AZOBR_RS01595 overlap by 8 nucleotides AZOBR_RS01595 and AZOBR_RS01600 are separated by 3 nucleotides
AZOBR_RS01585: AZOBR_RS01585 - zinc transporter, at 325,058 to 326,044
_RS01585
AZOBR_RS01590: AZOBR_RS01590 - zinc ABC transporter ATP-binding protein, at 326,203 to 326,964
_RS01590
AZOBR_RS01595: AZOBR_RS01595 - zinc transporter, at 326,957 to 327,745
_RS01595
AZOBR_RS01600: AZOBR_RS01600 - LysR family transcriptional regulator, at 327,749 to 328,633
_RS01600
Position (kb) 326
327 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 325.339 kb on - strand, within AZOBR_RS01585 at 325.353 kb on + strand, within AZOBR_RS01585 at 325.359 kb on + strand, within AZOBR_RS01585 at 325.360 kb on - strand, within AZOBR_RS01585 at 325.470 kb on + strand, within AZOBR_RS01585 at 325.618 kb on + strand, within AZOBR_RS01585 at 325.618 kb on + strand, within AZOBR_RS01585 at 325.619 kb on - strand, within AZOBR_RS01585 at 325.619 kb on - strand, within AZOBR_RS01585 at 325.619 kb on - strand, within AZOBR_RS01585 at 325.845 kb on + strand, within AZOBR_RS01585 at 325.845 kb on + strand, within AZOBR_RS01585 at 325.845 kb on + strand, within AZOBR_RS01585 at 325.845 kb on + strand, within AZOBR_RS01585 at 325.845 kb on + strand, within AZOBR_RS01585 at 325.846 kb on - strand, within AZOBR_RS01585 at 325.846 kb on - strand, within AZOBR_RS01585 at 326.093 kb on + strand at 326.093 kb on + strand at 326.093 kb on + strand at 326.093 kb on + strand at 326.093 kb on + strand at 326.093 kb on + strand at 326.094 kb on - strand at 326.094 kb on - strand at 326.094 kb on - strand at 326.094 kb on - strand at 326.094 kb on - strand at 326.417 kb on - strand, within AZOBR_RS01590 at 326.417 kb on - strand, within AZOBR_RS01590 at 326.884 kb on + strand, within AZOBR_RS01590 at 326.884 kb on + strand, within AZOBR_RS01590 at 326.885 kb on - strand, within AZOBR_RS01590 at 326.885 kb on - strand, within AZOBR_RS01590 at 326.885 kb on - strand, within AZOBR_RS01590 at 326.885 kb on - strand, within AZOBR_RS01590 at 327.053 kb on + strand, within AZOBR_RS01595 at 327.054 kb on - strand, within AZOBR_RS01595 at 327.296 kb on + strand, within AZOBR_RS01595 at 327.347 kb on + strand, within AZOBR_RS01595 at 327.348 kb on - strand, within AZOBR_RS01595 at 327.348 kb on - strand, within AZOBR_RS01595
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.01 mg/ml remove 325,339 - AZOBR_RS01585 0.28 -0.7 325,353 + AZOBR_RS01585 0.30 +0.4 325,359 + AZOBR_RS01585 0.30 -2.2 325,360 - AZOBR_RS01585 0.31 +1.8 325,470 + AZOBR_RS01585 0.42 -0.6 325,618 + AZOBR_RS01585 0.57 -2.1 325,618 + AZOBR_RS01585 0.57 -3.1 325,619 - AZOBR_RS01585 0.57 -0.9 325,619 - AZOBR_RS01585 0.57 -0.4 325,619 - AZOBR_RS01585 0.57 -0.8 325,845 + AZOBR_RS01585 0.80 -0.5 325,845 + AZOBR_RS01585 0.80 -0.9 325,845 + AZOBR_RS01585 0.80 +1.0 325,845 + AZOBR_RS01585 0.80 -3.7 325,845 + AZOBR_RS01585 0.80 -2.4 325,846 - AZOBR_RS01585 0.80 -5.1 325,846 - AZOBR_RS01585 0.80 -0.9 326,093 + -1.7 326,093 + +1.3 326,093 + +0.2 326,093 + +0.7 326,093 + -0.8 326,093 + +0.2 326,094 - -1.7 326,094 - +1.3 326,094 - -4.7 326,094 - -1.2 326,094 - -0.3 326,417 - AZOBR_RS01590 0.28 -0.9 326,417 - AZOBR_RS01590 0.28 -0.9 326,884 + AZOBR_RS01590 0.89 +1.1 326,884 + AZOBR_RS01590 0.89 +0.7 326,885 - AZOBR_RS01590 0.90 -1.9 326,885 - AZOBR_RS01590 0.90 -2.4 326,885 - AZOBR_RS01590 0.90 -3.9 326,885 - AZOBR_RS01590 0.90 +0.6 327,053 + AZOBR_RS01595 0.12 +0.2 327,054 - AZOBR_RS01595 0.12 +1.0 327,296 + AZOBR_RS01595 0.43 -0.2 327,347 + AZOBR_RS01595 0.49 -1.3 327,348 - AZOBR_RS01595 0.50 -0.0 327,348 - AZOBR_RS01595 0.50 -0.4
Or see this region's nucleotide sequence