Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30035 and AO356_30040 are separated by 30 nucleotides AO356_30040 and AO356_30045 are separated by 39 nucleotides AO356_30045 and AO356_30050 are separated by 15 nucleotides
AO356_30035: AO356_30035 - aminomethyltransferase, at 7,008,018 to 7,009,148
_30035
AO356_30040: AO356_30040 - formyltetrahydrofolate deformylase, at 7,009,179 to 7,010,045
_30040
AO356_30045: AO356_30045 - potassium transporter, at 7,010,085 to 7,011,452
_30045
AO356_30050: AO356_30050 - aminomethyltransferase, at 7,011,468 to 7,013,810
_30050
Position (kb) 7010
7011
7012 Strain fitness (log2 ratio) -1
0
1 at 7009.200 kb on + strand at 7009.200 kb on + strand at 7009.200 kb on + strand at 7009.278 kb on + strand, within AO356_30040 at 7009.279 kb on - strand, within AO356_30040 at 7009.382 kb on - strand, within AO356_30040 at 7009.382 kb on - strand, within AO356_30040 at 7009.609 kb on - strand, within AO356_30040 at 7009.609 kb on - strand, within AO356_30040 at 7009.990 kb on - strand at 7010.099 kb on - strand at 7010.099 kb on - strand at 7010.099 kb on - strand at 7010.193 kb on + strand at 7010.194 kb on - strand at 7010.229 kb on + strand, within AO356_30045 at 7010.230 kb on - strand, within AO356_30045 at 7010.283 kb on + strand, within AO356_30045 at 7010.283 kb on + strand, within AO356_30045 at 7010.284 kb on - strand, within AO356_30045 at 7010.290 kb on - strand, within AO356_30045 at 7010.401 kb on - strand, within AO356_30045 at 7010.439 kb on + strand, within AO356_30045 at 7010.740 kb on - strand, within AO356_30045 at 7010.740 kb on - strand, within AO356_30045 at 7010.825 kb on - strand, within AO356_30045 at 7010.980 kb on - strand, within AO356_30045 at 7010.980 kb on - strand, within AO356_30045 at 7011.207 kb on + strand, within AO356_30045 at 7011.207 kb on + strand, within AO356_30045 at 7011.705 kb on - strand, within AO356_30050 at 7012.004 kb on - strand, within AO356_30050
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 7,009,200 + -0.7 7,009,200 + +0.3 7,009,200 + -0.3 7,009,278 + AO356_30040 0.11 -1.4 7,009,279 - AO356_30040 0.12 -0.9 7,009,382 - AO356_30040 0.23 +0.6 7,009,382 - AO356_30040 0.23 -0.1 7,009,609 - AO356_30040 0.50 -0.2 7,009,609 - AO356_30040 0.50 +0.7 7,009,990 - -0.4 7,010,099 - +0.5 7,010,099 - +1.1 7,010,099 - -0.5 7,010,193 + +0.2 7,010,194 - +0.3 7,010,229 + AO356_30045 0.11 +0.0 7,010,230 - AO356_30045 0.11 -0.6 7,010,283 + AO356_30045 0.14 -0.7 7,010,283 + AO356_30045 0.14 +1.6 7,010,284 - AO356_30045 0.15 +1.0 7,010,290 - AO356_30045 0.15 +0.1 7,010,401 - AO356_30045 0.23 +0.2 7,010,439 + AO356_30045 0.26 +0.0 7,010,740 - AO356_30045 0.48 -0.1 7,010,740 - AO356_30045 0.48 -0.3 7,010,825 - AO356_30045 0.54 +0.5 7,010,980 - AO356_30045 0.65 +0.5 7,010,980 - AO356_30045 0.65 -0.0 7,011,207 + AO356_30045 0.82 +0.6 7,011,207 + AO356_30045 0.82 -0.2 7,011,705 - AO356_30050 0.10 +0.6 7,012,004 - AO356_30050 0.23 -0.1
Or see this region's nucleotide sequence