Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29905 and AO356_29910 are separated by 293 nucleotides AO356_29910 and AO356_29915 are separated by 280 nucleotides
AO356_29905: AO356_29905 - hypothetical protein, at 6,955,136 to 6,955,807
_29905
AO356_29910: AO356_29910 - hypothetical protein, at 6,956,101 to 6,956,556
_29910
AO356_29915: AO356_29915 - hypothetical protein, at 6,956,837 to 6,957,559
_29915
Position (kb)
6956
6957 Strain fitness (log2 ratio)
-1
0
1 at 6955.103 kb on - strand at 6955.110 kb on + strand at 6955.113 kb on + strand at 6955.114 kb on - strand at 6955.233 kb on + strand, within AO356_29905 at 6955.234 kb on - strand, within AO356_29905 at 6955.254 kb on + strand, within AO356_29905 at 6955.254 kb on + strand, within AO356_29905 at 6955.254 kb on + strand, within AO356_29905 at 6955.260 kb on + strand, within AO356_29905 at 6955.260 kb on + strand, within AO356_29905 at 6955.260 kb on + strand, within AO356_29905 at 6955.261 kb on - strand, within AO356_29905 at 6955.261 kb on - strand, within AO356_29905 at 6955.273 kb on + strand, within AO356_29905 at 6955.273 kb on + strand, within AO356_29905 at 6955.274 kb on - strand, within AO356_29905 at 6955.305 kb on + strand, within AO356_29905 at 6955.305 kb on + strand, within AO356_29905 at 6955.306 kb on - strand, within AO356_29905 at 6955.306 kb on - strand, within AO356_29905 at 6955.340 kb on - strand, within AO356_29905 at 6955.402 kb on - strand, within AO356_29905 at 6955.402 kb on - strand, within AO356_29905 at 6955.402 kb on - strand, within AO356_29905 at 6955.527 kb on + strand, within AO356_29905 at 6955.528 kb on - strand, within AO356_29905 at 6955.528 kb on - strand, within AO356_29905 at 6955.546 kb on - strand, within AO356_29905 at 6955.557 kb on + strand, within AO356_29905 at 6955.557 kb on + strand, within AO356_29905 at 6955.557 kb on + strand, within AO356_29905 at 6955.558 kb on - strand, within AO356_29905 at 6955.561 kb on - strand, within AO356_29905 at 6955.610 kb on - strand, within AO356_29905 at 6955.686 kb on + strand, within AO356_29905 at 6955.687 kb on - strand, within AO356_29905 at 6955.687 kb on - strand, within AO356_29905 at 6955.690 kb on + strand, within AO356_29905 at 6955.690 kb on + strand, within AO356_29905 at 6955.720 kb on + strand, within AO356_29905 at 6955.721 kb on - strand, within AO356_29905 at 6955.721 kb on - strand, within AO356_29905 at 6955.769 kb on + strand at 6955.827 kb on + strand at 6955.838 kb on + strand at 6955.927 kb on + strand at 6955.927 kb on + strand at 6955.927 kb on + strand at 6955.927 kb on + strand at 6955.928 kb on - strand at 6955.943 kb on - strand at 6955.943 kb on - strand at 6955.982 kb on + strand at 6955.982 kb on + strand at 6955.983 kb on - strand at 6955.983 kb on - strand at 6955.983 kb on - strand at 6955.983 kb on - strand at 6955.983 kb on - strand at 6955.983 kb on - strand at 6956.102 kb on + strand at 6956.102 kb on + strand at 6956.103 kb on - strand at 6956.107 kb on + strand at 6956.115 kb on - strand at 6956.176 kb on - strand, within AO356_29910 at 6956.194 kb on + strand, within AO356_29910 at 6956.194 kb on + strand, within AO356_29910 at 6956.194 kb on + strand, within AO356_29910 at 6956.194 kb on + strand, within AO356_29910 at 6956.194 kb on + strand, within AO356_29910 at 6956.194 kb on + strand, within AO356_29910 at 6956.195 kb on - strand, within AO356_29910 at 6956.195 kb on - strand, within AO356_29910 at 6956.211 kb on - strand, within AO356_29910 at 6956.306 kb on + strand, within AO356_29910 at 6956.311 kb on + strand, within AO356_29910 at 6956.312 kb on - strand, within AO356_29910 at 6956.312 kb on - strand, within AO356_29910 at 6956.533 kb on + strand at 6956.534 kb on - strand at 6956.534 kb on - strand at 6956.534 kb on - strand at 6956.608 kb on + strand at 6956.608 kb on + strand at 6956.608 kb on + strand at 6956.608 kb on + strand at 6956.609 kb on - strand at 6956.609 kb on - strand at 6956.609 kb on - strand at 6956.609 kb on - strand at 6956.645 kb on + strand at 6956.645 kb on + strand at 6956.656 kb on + strand at 6956.681 kb on - strand at 6956.714 kb on - strand at 6956.760 kb on - strand at 6956.790 kb on + strand at 6956.859 kb on + strand at 6956.972 kb on + strand, within AO356_29915 at 6956.973 kb on - strand, within AO356_29915 at 6957.299 kb on + strand, within AO356_29915 at 6957.337 kb on + strand, within AO356_29915 at 6957.365 kb on + strand, within AO356_29915 at 6957.365 kb on + strand, within AO356_29915 at 6957.365 kb on + strand, within AO356_29915 at 6957.366 kb on - strand, within AO356_29915 at 6957.366 kb on - strand, within AO356_29915 at 6957.414 kb on + strand, within AO356_29915 at 6957.415 kb on - strand, within AO356_29915 at 6957.415 kb on - strand, within AO356_29915 at 6957.529 kb on - strand at 6957.538 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 6,955,103 - +0.2 6,955,110 + +0.7 6,955,113 + +0.8 6,955,114 - +0.3 6,955,233 + AO356_29905 0.14 -0.0 6,955,234 - AO356_29905 0.15 -0.6 6,955,254 + AO356_29905 0.18 -0.3 6,955,254 + AO356_29905 0.18 +0.7 6,955,254 + AO356_29905 0.18 +0.3 6,955,260 + AO356_29905 0.18 +0.5 6,955,260 + AO356_29905 0.18 +0.6 6,955,260 + AO356_29905 0.18 +0.6 6,955,261 - AO356_29905 0.19 -0.1 6,955,261 - AO356_29905 0.19 -0.2 6,955,273 + AO356_29905 0.20 -0.3 6,955,273 + AO356_29905 0.20 -0.1 6,955,274 - AO356_29905 0.21 -0.2 6,955,305 + AO356_29905 0.25 +1.0 6,955,305 + AO356_29905 0.25 +0.6 6,955,306 - AO356_29905 0.25 +0.2 6,955,306 - AO356_29905 0.25 +0.7 6,955,340 - AO356_29905 0.30 +0.9 6,955,402 - AO356_29905 0.40 -1.3 6,955,402 - AO356_29905 0.40 +0.7 6,955,402 - AO356_29905 0.40 -0.3 6,955,527 + AO356_29905 0.58 +1.3 6,955,528 - AO356_29905 0.58 +0.6 6,955,528 - AO356_29905 0.58 +0.2 6,955,546 - AO356_29905 0.61 -0.8 6,955,557 + AO356_29905 0.63 +1.0 6,955,557 + AO356_29905 0.63 -0.7 6,955,557 + AO356_29905 0.63 +1.7 6,955,558 - AO356_29905 0.63 -0.7 6,955,561 - AO356_29905 0.63 +0.3 6,955,610 - AO356_29905 0.71 +0.7 6,955,686 + AO356_29905 0.82 +0.8 6,955,687 - AO356_29905 0.82 +0.9 6,955,687 - AO356_29905 0.82 +1.2 6,955,690 + AO356_29905 0.82 +0.3 6,955,690 + AO356_29905 0.82 -0.1 6,955,720 + AO356_29905 0.87 -0.1 6,955,721 - AO356_29905 0.87 -1.3 6,955,721 - AO356_29905 0.87 +0.2 6,955,769 + +0.6 6,955,827 + -0.6 6,955,838 + +0.3 6,955,927 + -1.3 6,955,927 + +0.3 6,955,927 + +0.1 6,955,927 + -0.4 6,955,928 - +1.4 6,955,943 - +0.3 6,955,943 - -0.8 6,955,982 + +0.3 6,955,982 + -0.1 6,955,983 - +0.0 6,955,983 - +0.2 6,955,983 - +0.1 6,955,983 - +0.9 6,955,983 - +0.3 6,955,983 - +0.7 6,956,102 + -0.6 6,956,102 + -1.0 6,956,103 - -1.7 6,956,107 + +0.4 6,956,115 - +0.4 6,956,176 - AO356_29910 0.16 +0.8 6,956,194 + AO356_29910 0.20 -0.2 6,956,194 + AO356_29910 0.20 -0.6 6,956,194 + AO356_29910 0.20 -0.3 6,956,194 + AO356_29910 0.20 +0.3 6,956,194 + AO356_29910 0.20 -0.4 6,956,194 + AO356_29910 0.20 +0.0 6,956,195 - AO356_29910 0.21 +0.8 6,956,195 - AO356_29910 0.21 -0.1 6,956,211 - AO356_29910 0.24 +1.1 6,956,306 + AO356_29910 0.45 +0.5 6,956,311 + AO356_29910 0.46 +0.0 6,956,312 - AO356_29910 0.46 -0.0 6,956,312 - AO356_29910 0.46 -0.0 6,956,533 + -0.9 6,956,534 - -0.5 6,956,534 - +0.3 6,956,534 - +0.1 6,956,608 + +0.4 6,956,608 + +0.5 6,956,608 + +1.0 6,956,608 + +1.0 6,956,609 - -0.8 6,956,609 - -0.6 6,956,609 - -1.2 6,956,609 - +0.3 6,956,645 + +0.4 6,956,645 + -1.6 6,956,656 + +1.4 6,956,681 - -0.7 6,956,714 - -1.7 6,956,760 - +0.5 6,956,790 + -0.5 6,956,859 + +0.6 6,956,972 + AO356_29915 0.19 -0.8 6,956,973 - AO356_29915 0.19 -1.0 6,957,299 + AO356_29915 0.64 -0.7 6,957,337 + AO356_29915 0.69 -1.5 6,957,365 + AO356_29915 0.73 +0.0 6,957,365 + AO356_29915 0.73 -0.1 6,957,365 + AO356_29915 0.73 +0.3 6,957,366 - AO356_29915 0.73 -0.1 6,957,366 - AO356_29915 0.73 +1.2 6,957,414 + AO356_29915 0.80 -0.3 6,957,415 - AO356_29915 0.80 +0.4 6,957,415 - AO356_29915 0.80 +0.3 6,957,529 - +1.1 6,957,538 + +0.1
Or see this region's nucleotide sequence