Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29140 and AO356_29145 are separated by 69 nucleotides AO356_29145 and AO356_29150 are separated by 12 nucleotides
AO356_29140: AO356_29140 - BNR domain-containing protein, at 6,775,108 to 6,776,211
_29140
AO356_29145: AO356_29145 - hypothetical protein, at 6,776,281 to 6,777,645
_29145
AO356_29150: AO356_29150 - hypothetical protein, at 6,777,658 to 6,779,337
_29150
Position (kb)
6776
6777
6778 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6776.068 kb on + strand, within AO356_29140 at 6776.169 kb on - strand at 6776.211 kb on + strand at 6776.216 kb on + strand at 6776.217 kb on - strand at 6776.351 kb on + strand at 6776.411 kb on + strand at 6776.455 kb on + strand, within AO356_29145 at 6776.549 kb on + strand, within AO356_29145 at 6776.618 kb on - strand, within AO356_29145 at 6776.618 kb on - strand, within AO356_29145 at 6776.618 kb on - strand, within AO356_29145 at 6776.618 kb on - strand, within AO356_29145 at 6776.634 kb on - strand, within AO356_29145 at 6776.705 kb on + strand, within AO356_29145 at 6776.706 kb on - strand, within AO356_29145 at 6776.714 kb on + strand, within AO356_29145 at 6776.714 kb on + strand, within AO356_29145 at 6776.715 kb on - strand, within AO356_29145 at 6776.715 kb on - strand, within AO356_29145 at 6777.011 kb on + strand, within AO356_29145 at 6777.080 kb on + strand, within AO356_29145 at 6777.081 kb on - strand, within AO356_29145 at 6777.213 kb on + strand, within AO356_29145 at 6777.213 kb on + strand, within AO356_29145 at 6777.214 kb on - strand, within AO356_29145 at 6777.368 kb on + strand, within AO356_29145 at 6777.398 kb on + strand, within AO356_29145 at 6777.398 kb on + strand, within AO356_29145 at 6777.449 kb on + strand, within AO356_29145 at 6777.717 kb on - strand at 6777.717 kb on - strand at 6777.761 kb on + strand at 6777.762 kb on - strand at 6777.774 kb on - strand at 6777.774 kb on - strand at 6777.888 kb on - strand, within AO356_29150 at 6777.951 kb on - strand, within AO356_29150 at 6778.238 kb on + strand, within AO356_29150 at 6778.238 kb on + strand, within AO356_29150 at 6778.304 kb on + strand, within AO356_29150 at 6778.358 kb on + strand, within AO356_29150 at 6778.358 kb on + strand, within AO356_29150 at 6778.587 kb on - strand, within AO356_29150 at 6778.587 kb on - strand, within AO356_29150
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 6,776,068 + AO356_29140 0.87 -0.0 6,776,169 - -0.0 6,776,211 + -0.7 6,776,216 + +0.6 6,776,217 - -0.9 6,776,351 + -0.9 6,776,411 + +0.2 6,776,455 + AO356_29145 0.13 -0.7 6,776,549 + AO356_29145 0.20 +0.1 6,776,618 - AO356_29145 0.25 -0.2 6,776,618 - AO356_29145 0.25 -1.0 6,776,618 - AO356_29145 0.25 +0.1 6,776,618 - AO356_29145 0.25 +0.4 6,776,634 - AO356_29145 0.26 -0.0 6,776,705 + AO356_29145 0.31 -0.4 6,776,706 - AO356_29145 0.31 +0.2 6,776,714 + AO356_29145 0.32 +2.1 6,776,714 + AO356_29145 0.32 -0.1 6,776,715 - AO356_29145 0.32 +0.6 6,776,715 - AO356_29145 0.32 -1.6 6,777,011 + AO356_29145 0.53 -1.0 6,777,080 + AO356_29145 0.59 -0.4 6,777,081 - AO356_29145 0.59 -0.0 6,777,213 + AO356_29145 0.68 -1.0 6,777,213 + AO356_29145 0.68 -0.4 6,777,214 - AO356_29145 0.68 -1.2 6,777,368 + AO356_29145 0.80 +0.3 6,777,398 + AO356_29145 0.82 +0.1 6,777,398 + AO356_29145 0.82 +0.0 6,777,449 + AO356_29145 0.86 +0.6 6,777,717 - +0.8 6,777,717 - +0.8 6,777,761 + -1.9 6,777,762 - +1.0 6,777,774 - -0.1 6,777,774 - -0.4 6,777,888 - AO356_29150 0.14 -0.6 6,777,951 - AO356_29150 0.17 +0.6 6,778,238 + AO356_29150 0.35 +0.6 6,778,238 + AO356_29150 0.35 +0.6 6,778,304 + AO356_29150 0.38 +0.1 6,778,358 + AO356_29150 0.42 -0.1 6,778,358 + AO356_29150 0.42 -0.8 6,778,587 - AO356_29150 0.55 +0.3 6,778,587 - AO356_29150 0.55 +0.1
Or see this region's nucleotide sequence