Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26360 and AO356_26365 are separated by 259 nucleotides AO356_26365 and AO356_26370 are separated by 3 nucleotides
AO356_26360: AO356_26360 - enoyl-CoA hydratase, at 5,970,624 to 5,971,397
_26360
AO356_26365: AO356_26365 - acyl-CoA dehydrogenase, at 5,971,657 to 5,972,808
_26365
AO356_26370: AO356_26370 - crotonase, at 5,972,812 to 5,973,918
_26370
Position (kb) 5971
5972
5973 Strain fitness (log2 ratio) -1
0
1 at 5970.858 kb on + strand, within AO356_26360 at 5970.859 kb on - strand, within AO356_26360 at 5971.126 kb on + strand, within AO356_26360 at 5971.392 kb on - strand at 5971.395 kb on + strand at 5971.395 kb on + strand at 5971.395 kb on + strand at 5971.395 kb on + strand at 5971.395 kb on + strand at 5971.395 kb on + strand at 5971.395 kb on + strand at 5971.457 kb on + strand at 5971.457 kb on + strand at 5971.457 kb on + strand at 5971.458 kb on - strand at 5971.472 kb on + strand at 5971.473 kb on - strand at 5971.590 kb on + strand at 5971.658 kb on + strand at 5971.659 kb on - strand at 5971.702 kb on + strand at 5971.703 kb on - strand at 5971.703 kb on - strand at 5971.721 kb on + strand at 5971.721 kb on + strand at 5971.721 kb on + strand at 5971.722 kb on - strand at 5971.722 kb on - strand at 5971.722 kb on - strand at 5971.760 kb on - strand at 5971.801 kb on + strand, within AO356_26365 at 5971.802 kb on - strand, within AO356_26365 at 5971.802 kb on - strand, within AO356_26365 at 5972.239 kb on - strand, within AO356_26365 at 5972.609 kb on + strand, within AO356_26365 at 5972.609 kb on + strand, within AO356_26365 at 5972.619 kb on - strand, within AO356_26365 at 5972.673 kb on + strand, within AO356_26365 at 5972.674 kb on - strand, within AO356_26365 at 5972.674 kb on - strand, within AO356_26365 at 5973.326 kb on + strand, within AO356_26370 at 5973.326 kb on + strand, within AO356_26370 at 5973.347 kb on + strand, within AO356_26370 at 5973.347 kb on + strand, within AO356_26370 at 5973.348 kb on - strand, within AO356_26370 at 5973.348 kb on - strand, within AO356_26370 at 5973.348 kb on - strand, within AO356_26370 at 5973.374 kb on - strand, within AO356_26370 at 5973.392 kb on + strand, within AO356_26370 at 5973.392 kb on + strand, within AO356_26370 at 5973.393 kb on - strand, within AO356_26370 at 5973.393 kb on - strand, within AO356_26370 at 5973.428 kb on + strand, within AO356_26370 at 5973.428 kb on + strand, within AO356_26370 at 5973.428 kb on + strand, within AO356_26370 at 5973.609 kb on - strand, within AO356_26370 at 5973.675 kb on + strand, within AO356_26370 at 5973.718 kb on + strand, within AO356_26370
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 5,970,858 + AO356_26360 0.30 +0.4 5,970,859 - AO356_26360 0.30 -0.2 5,971,126 + AO356_26360 0.65 -1.1 5,971,392 - +1.0 5,971,395 + -0.6 5,971,395 + -0.0 5,971,395 + -0.1 5,971,395 + -0.2 5,971,395 + -0.0 5,971,395 + +1.1 5,971,395 + +0.8 5,971,457 + -0.2 5,971,457 + +0.9 5,971,457 + +0.0 5,971,458 - -0.7 5,971,472 + -0.4 5,971,473 - -0.6 5,971,590 + +0.5 5,971,658 + -0.8 5,971,659 - -0.5 5,971,702 + -0.3 5,971,703 - +1.1 5,971,703 - -1.5 5,971,721 + -0.4 5,971,721 + +0.7 5,971,721 + +1.3 5,971,722 - -0.1 5,971,722 - +0.9 5,971,722 - +0.4 5,971,760 - -0.0 5,971,801 + AO356_26365 0.12 -0.3 5,971,802 - AO356_26365 0.13 -0.4 5,971,802 - AO356_26365 0.13 +0.6 5,972,239 - AO356_26365 0.51 +0.4 5,972,609 + AO356_26365 0.83 -0.3 5,972,609 + AO356_26365 0.83 +1.3 5,972,619 - AO356_26365 0.84 -0.2 5,972,673 + AO356_26365 0.88 +0.8 5,972,674 - AO356_26365 0.88 +1.1 5,972,674 - AO356_26365 0.88 +0.5 5,973,326 + AO356_26370 0.46 -0.2 5,973,326 + AO356_26370 0.46 +0.2 5,973,347 + AO356_26370 0.48 +1.4 5,973,347 + AO356_26370 0.48 +0.5 5,973,348 - AO356_26370 0.48 +0.7 5,973,348 - AO356_26370 0.48 -0.2 5,973,348 - AO356_26370 0.48 +0.4 5,973,374 - AO356_26370 0.51 -0.9 5,973,392 + AO356_26370 0.52 -0.8 5,973,392 + AO356_26370 0.52 +0.8 5,973,393 - AO356_26370 0.52 +0.8 5,973,393 - AO356_26370 0.52 +1.0 5,973,428 + AO356_26370 0.56 +1.7 5,973,428 + AO356_26370 0.56 +0.2 5,973,428 + AO356_26370 0.56 +0.3 5,973,609 - AO356_26370 0.72 -0.1 5,973,675 + AO356_26370 0.78 -1.6 5,973,718 + AO356_26370 0.82 +0.7
Or see this region's nucleotide sequence