Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26290 and AO356_26295 are separated by 36 nucleotides AO356_26295 and AO356_26300 are separated by 709 nucleotides
AO356_26290: AO356_26290 - TonB-dependent receptor, at 5,954,562 to 5,956,985
_26290
AO356_26295: AO356_26295 - ribosomal protein S3AE, at 5,957,022 to 5,957,423
_26295
AO356_26300: AO356_26300 - hypothetical protein, at 5,958,133 to 5,958,612
_26300
Position (kb)
5957
5958 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5956.054 kb on + strand, within AO356_26290 at 5956.102 kb on - strand, within AO356_26290 at 5956.308 kb on + strand, within AO356_26290 at 5956.317 kb on + strand, within AO356_26290 at 5956.318 kb on - strand, within AO356_26290 at 5956.318 kb on - strand, within AO356_26290 at 5956.318 kb on - strand, within AO356_26290 at 5956.318 kb on - strand, within AO356_26290 at 5956.318 kb on - strand, within AO356_26290 at 5956.318 kb on - strand, within AO356_26290 at 5956.422 kb on + strand, within AO356_26290 at 5956.422 kb on + strand, within AO356_26290 at 5956.672 kb on - strand, within AO356_26290 at 5956.744 kb on - strand at 5956.759 kb on - strand at 5956.891 kb on - strand at 5956.956 kb on + strand at 5956.957 kb on - strand at 5956.957 kb on - strand at 5956.957 kb on - strand at 5956.983 kb on + strand at 5957.274 kb on - strand, within AO356_26295 at 5957.541 kb on - strand at 5958.134 kb on + strand at 5958.135 kb on - strand at 5958.135 kb on - strand at 5958.135 kb on - strand at 5958.135 kb on - strand at 5958.135 kb on - strand at 5958.135 kb on - strand at 5958.135 kb on - strand at 5958.248 kb on + strand, within AO356_26300 at 5958.248 kb on + strand, within AO356_26300 at 5958.249 kb on - strand, within AO356_26300 at 5958.249 kb on - strand, within AO356_26300 at 5958.290 kb on + strand, within AO356_26300 at 5958.290 kb on + strand, within AO356_26300 at 5958.329 kb on + strand, within AO356_26300 at 5958.336 kb on - strand, within AO356_26300 at 5958.336 kb on - strand, within AO356_26300 at 5958.390 kb on - strand, within AO356_26300
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 5,956,054 + AO356_26290 0.62 -0.3 5,956,102 - AO356_26290 0.64 -0.7 5,956,308 + AO356_26290 0.72 -1.8 5,956,317 + AO356_26290 0.72 -0.0 5,956,318 - AO356_26290 0.72 +1.0 5,956,318 - AO356_26290 0.72 +1.6 5,956,318 - AO356_26290 0.72 -0.2 5,956,318 - AO356_26290 0.72 +0.1 5,956,318 - AO356_26290 0.72 +0.6 5,956,318 - AO356_26290 0.72 +1.2 5,956,422 + AO356_26290 0.77 -1.3 5,956,422 + AO356_26290 0.77 +1.8 5,956,672 - AO356_26290 0.87 +1.0 5,956,744 - +0.3 5,956,759 - +0.7 5,956,891 - +0.0 5,956,956 + +1.2 5,956,957 - -0.1 5,956,957 - +0.4 5,956,957 - -1.0 5,956,983 + +0.5 5,957,274 - AO356_26295 0.63 +1.2 5,957,541 - +0.6 5,958,134 + -0.2 5,958,135 - -0.4 5,958,135 - +0.9 5,958,135 - -2.2 5,958,135 - +0.4 5,958,135 - +0.3 5,958,135 - +0.0 5,958,135 - -0.4 5,958,248 + AO356_26300 0.24 -0.7 5,958,248 + AO356_26300 0.24 -0.7 5,958,249 - AO356_26300 0.24 -0.3 5,958,249 - AO356_26300 0.24 -0.3 5,958,290 + AO356_26300 0.33 +0.5 5,958,290 + AO356_26300 0.33 +1.1 5,958,329 + AO356_26300 0.41 -0.1 5,958,336 - AO356_26300 0.42 +0.4 5,958,336 - AO356_26300 0.42 -0.3 5,958,390 - AO356_26300 0.54 +1.5
Or see this region's nucleotide sequence