Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26000 and AO356_26005 are separated by 228 nucleotides AO356_26005 and AO356_26010 are separated by 20 nucleotides
AO356_26000: AO356_26000 - glycogen debranching protein, at 5,878,587 to 5,880,746
_26000
AO356_26005: AO356_26005 - hypothetical protein, at 5,880,975 to 5,881,319
_26005
AO356_26010: AO356_26010 - maltooligosyl trehalose synthase, at 5,881,340 to 5,884,126
_26010
Position (kb)
5880
5881
5882 Strain fitness (log2 ratio)
-2
-1
0
1 at 5880.017 kb on - strand, within AO356_26000 at 5880.025 kb on + strand, within AO356_26000 at 5880.217 kb on + strand, within AO356_26000 at 5880.218 kb on - strand, within AO356_26000 at 5880.413 kb on - strand, within AO356_26000 at 5880.466 kb on + strand, within AO356_26000 at 5880.467 kb on - strand, within AO356_26000 at 5880.467 kb on - strand, within AO356_26000 at 5880.475 kb on + strand, within AO356_26000 at 5880.475 kb on + strand, within AO356_26000 at 5880.476 kb on - strand, within AO356_26000 at 5880.490 kb on + strand, within AO356_26000 at 5880.490 kb on + strand, within AO356_26000 at 5880.490 kb on + strand, within AO356_26000 at 5880.490 kb on + strand, within AO356_26000 at 5880.490 kb on + strand, within AO356_26000 at 5880.491 kb on - strand, within AO356_26000 at 5880.491 kb on - strand, within AO356_26000 at 5880.491 kb on - strand, within AO356_26000 at 5880.491 kb on - strand, within AO356_26000 at 5880.530 kb on - strand, within AO356_26000 at 5880.530 kb on - strand, within AO356_26000 at 5880.746 kb on + strand at 5880.747 kb on - strand at 5880.747 kb on - strand at 5880.747 kb on - strand at 5880.774 kb on + strand at 5880.843 kb on - strand at 5881.259 kb on + strand, within AO356_26005 at 5881.259 kb on + strand, within AO356_26005 at 5881.260 kb on - strand, within AO356_26005 at 5881.260 kb on - strand, within AO356_26005 at 5881.304 kb on + strand at 5881.305 kb on - strand at 5881.352 kb on - strand at 5881.733 kb on + strand, within AO356_26010 at 5881.848 kb on + strand, within AO356_26010 at 5882.016 kb on + strand, within AO356_26010 at 5882.017 kb on - strand, within AO356_26010 at 5882.017 kb on - strand, within AO356_26010 at 5882.167 kb on - strand, within AO356_26010 at 5882.257 kb on - strand, within AO356_26010 at 5882.257 kb on - strand, within AO356_26010
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 5,880,017 - AO356_26000 0.66 -0.3 5,880,025 + AO356_26000 0.67 -1.1 5,880,217 + AO356_26000 0.75 -0.3 5,880,218 - AO356_26000 0.76 -1.0 5,880,413 - AO356_26000 0.85 -0.9 5,880,466 + AO356_26000 0.87 +0.1 5,880,467 - AO356_26000 0.87 +0.4 5,880,467 - AO356_26000 0.87 +1.0 5,880,475 + AO356_26000 0.87 +0.1 5,880,475 + AO356_26000 0.87 +0.5 5,880,476 - AO356_26000 0.87 -1.6 5,880,490 + AO356_26000 0.88 -1.4 5,880,490 + AO356_26000 0.88 -1.6 5,880,490 + AO356_26000 0.88 +0.1 5,880,490 + AO356_26000 0.88 +0.4 5,880,490 + AO356_26000 0.88 -0.2 5,880,491 - AO356_26000 0.88 +0.6 5,880,491 - AO356_26000 0.88 -0.8 5,880,491 - AO356_26000 0.88 -0.2 5,880,491 - AO356_26000 0.88 +0.5 5,880,530 - AO356_26000 0.90 -2.3 5,880,530 - AO356_26000 0.90 +1.2 5,880,746 + -0.5 5,880,747 - +0.7 5,880,747 - +0.5 5,880,747 - -0.6 5,880,774 + -1.7 5,880,843 - +0.8 5,881,259 + AO356_26005 0.82 -0.4 5,881,259 + AO356_26005 0.82 +1.6 5,881,260 - AO356_26005 0.83 +1.5 5,881,260 - AO356_26005 0.83 -0.3 5,881,304 + -0.2 5,881,305 - -0.4 5,881,352 - +0.1 5,881,733 + AO356_26010 0.14 -0.3 5,881,848 + AO356_26010 0.18 -0.7 5,882,016 + AO356_26010 0.24 -0.5 5,882,017 - AO356_26010 0.24 -0.2 5,882,017 - AO356_26010 0.24 -1.3 5,882,167 - AO356_26010 0.30 -0.5 5,882,257 - AO356_26010 0.33 -0.0 5,882,257 - AO356_26010 0.33 -0.6
Or see this region's nucleotide sequence