Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25860 and AO356_25865 are separated by 118 nucleotides AO356_25865 and AO356_25870 are separated by 191 nucleotides AO356_25870 and AO356_25875 overlap by 4 nucleotides
AO356_25860: AO356_25860 - hypothetical protein, at 5,846,346 to 5,847,017
_25860
AO356_25865: AO356_25865 - peroxidase, at 5,847,136 to 5,847,636
_25865
AO356_25870: AO356_25870 - secretion protein HlyD, at 5,847,828 to 5,849,141
_25870
AO356_25875: AO356_25875 - multidrug transporter, at 5,849,138 to 5,852,233
_25875
Position (kb) 5847
5848
5849
5850 Strain fitness (log2 ratio) -1
0
1 at 5847.015 kb on + strand at 5847.016 kb on - strand at 5847.055 kb on + strand at 5847.067 kb on + strand at 5847.067 kb on + strand at 5847.068 kb on - strand at 5847.485 kb on - strand, within AO356_25865 at 5847.607 kb on + strand at 5847.607 kb on + strand at 5847.607 kb on + strand at 5847.717 kb on + strand at 5847.725 kb on + strand at 5847.773 kb on - strand at 5848.337 kb on + strand, within AO356_25870 at 5848.337 kb on + strand, within AO356_25870 at 5848.338 kb on - strand, within AO356_25870 at 5848.384 kb on - strand, within AO356_25870 at 5848.822 kb on + strand, within AO356_25870 at 5848.875 kb on + strand, within AO356_25870 at 5848.904 kb on + strand, within AO356_25870 at 5848.905 kb on - strand, within AO356_25870 at 5849.054 kb on + strand at 5849.522 kb on + strand, within AO356_25875 at 5849.569 kb on + strand, within AO356_25875 at 5849.569 kb on + strand, within AO356_25875 at 5849.752 kb on + strand, within AO356_25875 at 5849.858 kb on + strand, within AO356_25875 at 5849.880 kb on - strand, within AO356_25875
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 5,847,015 + +0.4 5,847,016 - +0.1 5,847,055 + -1.7 5,847,067 + +0.8 5,847,067 + +0.8 5,847,068 - -0.1 5,847,485 - AO356_25865 0.70 -0.6 5,847,607 + -0.1 5,847,607 + +0.1 5,847,607 + -1.4 5,847,717 + -0.4 5,847,725 + +0.6 5,847,773 - -1.1 5,848,337 + AO356_25870 0.39 +0.6 5,848,337 + AO356_25870 0.39 -1.5 5,848,338 - AO356_25870 0.39 -1.5 5,848,384 - AO356_25870 0.42 -0.9 5,848,822 + AO356_25870 0.76 -1.2 5,848,875 + AO356_25870 0.80 -1.3 5,848,904 + AO356_25870 0.82 -1.4 5,848,905 - AO356_25870 0.82 -0.6 5,849,054 + -0.2 5,849,522 + AO356_25875 0.12 +1.3 5,849,569 + AO356_25875 0.14 +0.1 5,849,569 + AO356_25875 0.14 +0.3 5,849,752 + AO356_25875 0.20 -1.4 5,849,858 + AO356_25875 0.23 +0.1 5,849,880 - AO356_25875 0.24 +0.3
Or see this region's nucleotide sequence