Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25525 and AO356_25530 are separated by 79 nucleotides AO356_25530 and AO356_25535 are separated by 51 nucleotides AO356_25535 and AO356_25540 are separated by 44 nucleotides
AO356_25525: AO356_25525 - moaF, at 5,771,756 to 5,772,577
_25525
AO356_25530: AO356_25530 - LuxR family transcriptional regulator, at 5,772,657 to 5,773,313
_25530
AO356_25535: AO356_25535 - hypothetical protein, at 5,773,365 to 5,773,730
_25535
AO356_25540: AO356_25540 - FAD-dependent oxidoreductase, at 5,773,775 to 5,775,073
_25540
Position (kb)
5773
5774 Strain fitness (log2 ratio)
-1
0
1 at 5772.566 kb on - strand at 5772.601 kb on + strand at 5772.795 kb on + strand, within AO356_25530 at 5773.231 kb on + strand, within AO356_25530 at 5773.232 kb on - strand, within AO356_25530 at 5773.381 kb on + strand at 5773.462 kb on + strand, within AO356_25535 at 5773.462 kb on + strand, within AO356_25535 at 5773.896 kb on + strand at 5774.235 kb on + strand, within AO356_25540 at 5774.236 kb on - strand, within AO356_25540 at 5774.307 kb on + strand, within AO356_25540 at 5774.430 kb on + strand, within AO356_25540 at 5774.431 kb on - strand, within AO356_25540 at 5774.559 kb on + strand, within AO356_25540 at 5774.692 kb on - strand, within AO356_25540 at 5774.692 kb on - strand, within AO356_25540 at 5774.727 kb on + strand, within AO356_25540
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 5,772,566 - -0.3 5,772,601 + -0.2 5,772,795 + AO356_25530 0.21 -1.2 5,773,231 + AO356_25530 0.87 -1.1 5,773,232 - AO356_25530 0.88 +0.5 5,773,381 + -0.2 5,773,462 + AO356_25535 0.27 -0.1 5,773,462 + AO356_25535 0.27 -1.2 5,773,896 + +0.2 5,774,235 + AO356_25540 0.35 +0.2 5,774,236 - AO356_25540 0.35 +0.1 5,774,307 + AO356_25540 0.41 -0.8 5,774,430 + AO356_25540 0.50 +0.3 5,774,431 - AO356_25540 0.51 -0.7 5,774,559 + AO356_25540 0.60 +0.7 5,774,692 - AO356_25540 0.71 +0.2 5,774,692 - AO356_25540 0.71 -0.5 5,774,727 + AO356_25540 0.73 +0.4
Or see this region's nucleotide sequence