Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25125 and AO356_25130 are separated by 22 nucleotides AO356_25130 and AO356_25135 are separated by 140 nucleotides AO356_25135 and AO356_25140 are separated by 158 nucleotides
AO356_25125: AO356_25125 - short-chain dehydrogenase, at 5,686,924 to 5,688,114
_25125
AO356_25130: AO356_25130 - hypothetical protein, at 5,688,137 to 5,688,577
_25130
AO356_25135: AO356_25135 - iron-sulfur cluster repair di-iron protein, at 5,688,718 to 5,689,392
_25135
AO356_25140: AO356_25140 - transcriptional regulator, at 5,689,551 to 5,691,083
_25140
Position (kb) 5688
5689
5690 Strain fitness (log2 ratio) -2
-1
0
1 at 5688.055 kb on + strand at 5688.144 kb on - strand at 5688.215 kb on - strand, within AO356_25130 at 5688.324 kb on - strand, within AO356_25130 at 5688.458 kb on + strand, within AO356_25130 at 5688.459 kb on - strand, within AO356_25130 at 5688.563 kb on + strand at 5688.564 kb on - strand at 5688.564 kb on - strand at 5688.813 kb on - strand, within AO356_25135 at 5689.017 kb on - strand, within AO356_25135 at 5689.017 kb on - strand, within AO356_25135 at 5689.017 kb on - strand, within AO356_25135 at 5689.313 kb on + strand, within AO356_25135 at 5689.313 kb on + strand, within AO356_25135 at 5689.313 kb on + strand, within AO356_25135 at 5689.314 kb on - strand, within AO356_25135 at 5689.314 kb on - strand, within AO356_25135 at 5689.314 kb on - strand, within AO356_25135 at 5689.314 kb on - strand, within AO356_25135 at 5689.326 kb on + strand at 5689.326 kb on + strand at 5689.327 kb on - strand at 5689.638 kb on + strand at 5689.889 kb on - strand, within AO356_25140 at 5689.896 kb on + strand, within AO356_25140 at 5689.896 kb on + strand, within AO356_25140 at 5689.897 kb on - strand, within AO356_25140 at 5689.897 kb on - strand, within AO356_25140 at 5689.988 kb on + strand, within AO356_25140 at 5689.988 kb on + strand, within AO356_25140 at 5689.988 kb on + strand, within AO356_25140
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 5,688,055 + +1.0 5,688,144 - +0.1 5,688,215 - AO356_25130 0.18 -1.3 5,688,324 - AO356_25130 0.42 -0.2 5,688,458 + AO356_25130 0.73 +0.5 5,688,459 - AO356_25130 0.73 -0.6 5,688,563 + -1.5 5,688,564 - +0.9 5,688,564 - -0.6 5,688,813 - AO356_25135 0.14 +0.9 5,689,017 - AO356_25135 0.44 -0.2 5,689,017 - AO356_25135 0.44 -0.9 5,689,017 - AO356_25135 0.44 +0.8 5,689,313 + AO356_25135 0.88 +0.8 5,689,313 + AO356_25135 0.88 +0.7 5,689,313 + AO356_25135 0.88 +1.6 5,689,314 - AO356_25135 0.88 +0.4 5,689,314 - AO356_25135 0.88 -0.9 5,689,314 - AO356_25135 0.88 +0.2 5,689,314 - AO356_25135 0.88 -0.2 5,689,326 + -1.6 5,689,326 + +0.4 5,689,327 - -2.4 5,689,638 + -0.4 5,689,889 - AO356_25140 0.22 +0.4 5,689,896 + AO356_25140 0.23 -0.3 5,689,896 + AO356_25140 0.23 -0.5 5,689,897 - AO356_25140 0.23 +0.9 5,689,897 - AO356_25140 0.23 +0.5 5,689,988 + AO356_25140 0.29 -1.3 5,689,988 + AO356_25140 0.29 +0.3 5,689,988 + AO356_25140 0.29 -0.4
Or see this region's nucleotide sequence