Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24030 and AO356_24035 are separated by 831 nucleotides AO356_24035 and AO356_24040 are separated by 120 nucleotides
AO356_24030: AO356_24030 - sulfurtransferase, at 5,386,231 to 5,388,996
_24030
AO356_24035: AO356_24035 - hypothetical protein, at 5,389,828 to 5,390,346
_24035
AO356_24040: AO356_24040 - alpha/beta hydrolase, at 5,390,467 to 5,391,561
_24040
Position (kb)
5389
5390
5391 Strain fitness (log2 ratio)
-1
0
1 at 5389.068 kb on - strand at 5389.068 kb on - strand at 5389.203 kb on + strand at 5389.476 kb on - strand at 5389.761 kb on + strand at 5389.957 kb on + strand, within AO356_24035 at 5389.957 kb on + strand, within AO356_24035 at 5389.957 kb on + strand, within AO356_24035 at 5389.957 kb on + strand, within AO356_24035 at 5389.957 kb on + strand, within AO356_24035 at 5389.957 kb on + strand, within AO356_24035 at 5389.958 kb on - strand, within AO356_24035 at 5389.958 kb on - strand, within AO356_24035 at 5389.958 kb on - strand, within AO356_24035 at 5389.958 kb on - strand, within AO356_24035 at 5389.958 kb on - strand, within AO356_24035 at 5389.958 kb on - strand, within AO356_24035 at 5389.958 kb on - strand, within AO356_24035 at 5389.958 kb on - strand, within AO356_24035 at 5390.068 kb on + strand, within AO356_24035 at 5390.068 kb on + strand, within AO356_24035 at 5390.068 kb on + strand, within AO356_24035 at 5390.068 kb on + strand, within AO356_24035 at 5390.069 kb on - strand, within AO356_24035 at 5390.069 kb on - strand, within AO356_24035 at 5390.091 kb on + strand, within AO356_24035 at 5390.126 kb on - strand, within AO356_24035 at 5390.126 kb on - strand, within AO356_24035 at 5390.300 kb on + strand at 5390.301 kb on - strand at 5390.301 kb on - strand at 5390.301 kb on - strand at 5390.344 kb on + strand at 5390.345 kb on - strand at 5390.345 kb on - strand at 5390.345 kb on - strand at 5390.345 kb on - strand at 5390.391 kb on - strand at 5390.395 kb on - strand at 5390.472 kb on + strand at 5390.472 kb on + strand at 5390.472 kb on + strand at 5390.472 kb on + strand at 5390.472 kb on + strand at 5390.472 kb on + strand at 5390.473 kb on - strand at 5390.524 kb on + strand at 5390.525 kb on - strand at 5390.634 kb on + strand, within AO356_24040 at 5390.635 kb on - strand, within AO356_24040 at 5390.647 kb on + strand, within AO356_24040 at 5390.678 kb on + strand, within AO356_24040 at 5390.679 kb on - strand, within AO356_24040 at 5390.695 kb on + strand, within AO356_24040 at 5390.696 kb on - strand, within AO356_24040 at 5390.696 kb on - strand, within AO356_24040 at 5390.696 kb on - strand, within AO356_24040 at 5390.704 kb on + strand, within AO356_24040 at 5390.838 kb on + strand, within AO356_24040 at 5390.838 kb on + strand, within AO356_24040 at 5390.839 kb on - strand, within AO356_24040 at 5390.842 kb on + strand, within AO356_24040 at 5390.842 kb on + strand, within AO356_24040 at 5390.843 kb on - strand, within AO356_24040
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 5,389,068 - +1.0 5,389,068 - +0.2 5,389,203 + -0.0 5,389,476 - -0.1 5,389,761 + +1.2 5,389,957 + AO356_24035 0.25 -0.5 5,389,957 + AO356_24035 0.25 -1.6 5,389,957 + AO356_24035 0.25 -0.5 5,389,957 + AO356_24035 0.25 -0.8 5,389,957 + AO356_24035 0.25 -0.1 5,389,957 + AO356_24035 0.25 +0.5 5,389,958 - AO356_24035 0.25 -1.1 5,389,958 - AO356_24035 0.25 +1.4 5,389,958 - AO356_24035 0.25 -0.1 5,389,958 - AO356_24035 0.25 +0.1 5,389,958 - AO356_24035 0.25 +0.3 5,389,958 - AO356_24035 0.25 -0.1 5,389,958 - AO356_24035 0.25 -0.9 5,389,958 - AO356_24035 0.25 -1.4 5,390,068 + AO356_24035 0.46 -0.1 5,390,068 + AO356_24035 0.46 -0.9 5,390,068 + AO356_24035 0.46 -0.1 5,390,068 + AO356_24035 0.46 +1.1 5,390,069 - AO356_24035 0.46 -0.7 5,390,069 - AO356_24035 0.46 +0.1 5,390,091 + AO356_24035 0.51 -0.5 5,390,126 - AO356_24035 0.57 -0.1 5,390,126 - AO356_24035 0.57 +0.1 5,390,300 + -0.0 5,390,301 - -0.0 5,390,301 - -0.6 5,390,301 - -0.1 5,390,344 + -0.5 5,390,345 - +0.5 5,390,345 - -0.4 5,390,345 - +1.0 5,390,345 - -0.2 5,390,391 - +1.3 5,390,395 - +0.7 5,390,472 + +0.8 5,390,472 + +0.3 5,390,472 + +0.5 5,390,472 + +0.2 5,390,472 + +0.4 5,390,472 + +0.8 5,390,473 - -0.9 5,390,524 + +0.3 5,390,525 - -0.3 5,390,634 + AO356_24040 0.15 +0.9 5,390,635 - AO356_24040 0.15 -0.3 5,390,647 + AO356_24040 0.16 +0.3 5,390,678 + AO356_24040 0.19 -0.1 5,390,679 - AO356_24040 0.19 -0.2 5,390,695 + AO356_24040 0.21 +1.3 5,390,696 - AO356_24040 0.21 -0.1 5,390,696 - AO356_24040 0.21 +0.5 5,390,696 - AO356_24040 0.21 -0.5 5,390,704 + AO356_24040 0.22 -1.3 5,390,838 + AO356_24040 0.34 +0.4 5,390,838 + AO356_24040 0.34 +0.7 5,390,839 - AO356_24040 0.34 +0.5 5,390,842 + AO356_24040 0.34 -0.2 5,390,842 + AO356_24040 0.34 -0.1 5,390,843 - AO356_24040 0.34 -0.1
Or see this region's nucleotide sequence