Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23320 and AO356_23325 are separated by 232 nucleotides AO356_23325 and AO356_23330 are separated by 23 nucleotides
AO356_23320: AO356_23320 - 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase, at 5,229,290 to 5,230,405
_23320
AO356_23325: AO356_23325 - short-chain dehydrogenase, at 5,230,638 to 5,231,405
_23325
AO356_23330: AO356_23330 - aminoglycoside phosphotransferase, at 5,231,429 to 5,232,496
_23330
Position (kb) 5230
5231
5232 Strain fitness (log2 ratio) -2
-1
0
1 at 5230.011 kb on + strand, within AO356_23320 at 5230.011 kb on + strand, within AO356_23320 at 5230.011 kb on + strand, within AO356_23320 at 5230.011 kb on + strand, within AO356_23320 at 5230.684 kb on + strand at 5230.684 kb on + strand at 5230.684 kb on + strand at 5230.685 kb on - strand at 5230.685 kb on - strand at 5230.685 kb on - strand at 5230.709 kb on - strand at 5230.924 kb on + strand, within AO356_23325 at 5230.924 kb on + strand, within AO356_23325 at 5230.924 kb on + strand, within AO356_23325 at 5230.925 kb on - strand, within AO356_23325 at 5230.925 kb on - strand, within AO356_23325 at 5230.925 kb on - strand, within AO356_23325 at 5230.925 kb on - strand, within AO356_23325 at 5231.444 kb on - strand at 5231.538 kb on + strand, within AO356_23330 at 5231.541 kb on + strand, within AO356_23330 at 5231.541 kb on + strand, within AO356_23330 at 5231.542 kb on - strand, within AO356_23330 at 5231.542 kb on - strand, within AO356_23330 at 5231.542 kb on - strand, within AO356_23330 at 5231.580 kb on + strand, within AO356_23330 at 5231.580 kb on + strand, within AO356_23330 at 5231.581 kb on - strand, within AO356_23330 at 5231.581 kb on - strand, within AO356_23330 at 5231.581 kb on - strand, within AO356_23330 at 5231.586 kb on + strand, within AO356_23330 at 5231.586 kb on + strand, within AO356_23330 at 5231.587 kb on - strand, within AO356_23330 at 5231.587 kb on - strand, within AO356_23330 at 5231.587 kb on - strand, within AO356_23330 at 5231.590 kb on - strand, within AO356_23330 at 5231.590 kb on - strand, within AO356_23330 at 5231.590 kb on - strand, within AO356_23330 at 5231.590 kb on - strand, within AO356_23330 at 5231.590 kb on - strand, within AO356_23330 at 5231.590 kb on - strand, within AO356_23330 at 5231.635 kb on - strand, within AO356_23330 at 5231.635 kb on - strand, within AO356_23330 at 5231.991 kb on + strand, within AO356_23330 at 5231.992 kb on - strand, within AO356_23330 at 5231.992 kb on - strand, within AO356_23330 at 5232.033 kb on + strand, within AO356_23330 at 5232.033 kb on + strand, within AO356_23330 at 5232.081 kb on - strand, within AO356_23330 at 5232.165 kb on + strand, within AO356_23330 at 5232.166 kb on - strand, within AO356_23330 at 5232.166 kb on - strand, within AO356_23330 at 5232.207 kb on + strand, within AO356_23330 at 5232.207 kb on + strand, within AO356_23330 at 5232.207 kb on + strand, within AO356_23330 at 5232.207 kb on + strand, within AO356_23330 at 5232.207 kb on + strand, within AO356_23330 at 5232.208 kb on - strand, within AO356_23330 at 5232.208 kb on - strand, within AO356_23330 at 5232.208 kb on - strand, within AO356_23330 at 5232.348 kb on + strand, within AO356_23330 at 5232.348 kb on + strand, within AO356_23330 at 5232.348 kb on + strand, within AO356_23330
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 5,230,011 + AO356_23320 0.65 -0.2 5,230,011 + AO356_23320 0.65 +0.6 5,230,011 + AO356_23320 0.65 +0.0 5,230,011 + AO356_23320 0.65 +1.4 5,230,684 + -0.6 5,230,684 + -0.2 5,230,684 + -0.5 5,230,685 - +0.8 5,230,685 - -0.3 5,230,685 - +0.6 5,230,709 - -1.5 5,230,924 + AO356_23325 0.37 +1.1 5,230,924 + AO356_23325 0.37 +0.8 5,230,924 + AO356_23325 0.37 +0.8 5,230,925 - AO356_23325 0.37 -0.3 5,230,925 - AO356_23325 0.37 +0.8 5,230,925 - AO356_23325 0.37 -1.5 5,230,925 - AO356_23325 0.37 +1.0 5,231,444 - -0.5 5,231,538 + AO356_23330 0.10 +0.3 5,231,541 + AO356_23330 0.10 -0.3 5,231,541 + AO356_23330 0.10 -1.3 5,231,542 - AO356_23330 0.11 -0.2 5,231,542 - AO356_23330 0.11 +0.8 5,231,542 - AO356_23330 0.11 +0.7 5,231,580 + AO356_23330 0.14 +0.2 5,231,580 + AO356_23330 0.14 +1.0 5,231,581 - AO356_23330 0.14 -0.5 5,231,581 - AO356_23330 0.14 -0.3 5,231,581 - AO356_23330 0.14 +0.1 5,231,586 + AO356_23330 0.15 -0.3 5,231,586 + AO356_23330 0.15 +0.4 5,231,587 - AO356_23330 0.15 +0.1 5,231,587 - AO356_23330 0.15 -0.7 5,231,587 - AO356_23330 0.15 -0.1 5,231,590 - AO356_23330 0.15 +0.6 5,231,590 - AO356_23330 0.15 -1.1 5,231,590 - AO356_23330 0.15 -0.9 5,231,590 - AO356_23330 0.15 +0.6 5,231,590 - AO356_23330 0.15 -1.0 5,231,590 - AO356_23330 0.15 -0.5 5,231,635 - AO356_23330 0.19 +1.1 5,231,635 - AO356_23330 0.19 -0.8 5,231,991 + AO356_23330 0.53 -0.6 5,231,992 - AO356_23330 0.53 +0.2 5,231,992 - AO356_23330 0.53 -0.5 5,232,033 + AO356_23330 0.57 +0.7 5,232,033 + AO356_23330 0.57 +0.2 5,232,081 - AO356_23330 0.61 -0.2 5,232,165 + AO356_23330 0.69 -2.3 5,232,166 - AO356_23330 0.69 -0.5 5,232,166 - AO356_23330 0.69 +0.8 5,232,207 + AO356_23330 0.73 +0.6 5,232,207 + AO356_23330 0.73 +0.7 5,232,207 + AO356_23330 0.73 +0.2 5,232,207 + AO356_23330 0.73 +0.0 5,232,207 + AO356_23330 0.73 -0.3 5,232,208 - AO356_23330 0.73 -2.0 5,232,208 - AO356_23330 0.73 +0.1 5,232,208 - AO356_23330 0.73 +0.0 5,232,348 + AO356_23330 0.86 +0.3 5,232,348 + AO356_23330 0.86 -0.5 5,232,348 + AO356_23330 0.86 -0.5
Or see this region's nucleotide sequence